ENST00000350612.11 SUPT20H

Information
Transcript ID
ENST00000350612.11
Genome
hg19
Position
chr13:37,583,449-37,633,825
Strand
-
CDS length
2,340
Amino acid length
780
Gene symbol
SUPT20H
Gene type
protein-coding
Gene description
SPT20 homolog, SAGA complex component
Gene Entrez Gene ID
55578
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
26 37,583,449 37,583,946
25 37,584,689 37,584,792
24 37,586,329 37,586,434
23 37,591,382 37,591,501
22 37,593,479 37,593,534
21 37,595,585 37,595,739
20 37,596,148 37,596,217
19 37,598,172 37,598,330
18 37,598,477 37,598,579
17 37,599,457 37,599,574
16 37,600,341 37,600,373
15 37,600,927 37,600,953
14 37,602,285 37,602,442
13 37,603,902 37,603,973
12 37,605,704 37,605,760
11 37,605,876 37,606,032
10 37,607,586 37,607,725
9 37,614,542 37,614,595
8 37,614,713 37,614,829
7 37,618,215 37,618,318
6 37,619,384 37,619,510
5 37,621,672 37,621,738
4 37,622,015 37,622,073
3 37,622,701 37,622,736
2 37,625,625 37,625,720
1 37,633,696 37,633,825
CDS
Exon number Type Start Stop
26 CDS 37,583,809 37,583,946
25 CDS 37,584,689 37,584,792
24 CDS 37,586,329 37,586,434
23 CDS 37,591,382 37,591,501
22 CDS 37,593,479 37,593,534
21 CDS 37,595,585 37,595,739
20 CDS 37,596,148 37,596,217
19 CDS 37,598,172 37,598,330
18 CDS 37,598,477 37,598,579
17 CDS 37,599,457 37,599,574
16 CDS 37,600,341 37,600,373
15 CDS 37,600,927 37,600,953
14 CDS 37,602,285 37,602,442
13 CDS 37,603,902 37,603,973
12 CDS 37,605,704 37,605,760
11 CDS 37,605,876 37,606,032
10 CDS 37,607,586 37,607,725
9 CDS 37,614,542 37,614,595
8 CDS 37,614,713 37,614,829
7 CDS 37,618,215 37,618,318
6 CDS 37,619,384 37,619,510
5 CDS 37,621,672 37,621,738
4 CDS 37,622,015 37,622,073
3 CDS 37,622,701 37,622,736
2 CDS 37,625,625 37,625,627
Other genome
Genome Chromosome Start End Links
hg38 chr13 37,009,312 37,059,688 Link
CDS sequence
ATGCAACAAGCTTTAGAACTAGCTTTGGATCGTGCAGAGTATGTCATTGAAAGTGCCCGACAGAGACCTCCTAAAAGGAAATACCTATCAAGTGGAAGAAAATCTGTATTTCAAAAACTTTATGACTTGTATATTGAAGAATGTGAAAAAGAACCTGAAGTTAAGAAATTAAGAAGAAATGTGAACTTGTTAGAGAAGCTTGTTATGCAAGAGACTTTGTCATGTTTAGTGGTCAATCTATACCCAGGAAATGAGGGATATTCTCTGATGCTCAGGGGAAAAAACGGATCAGATTCCGAGACCATTCGACTGCCCTATGAAGAAGGAGAGTTGCTTGAATATTTGGATGCAGAAGAATTACCTCCTATTTTGGTTGATCTCCTAGAAAAATCTCAGGTTAATATTTTTCATTGCGGATGTGTCATAGCAGAAATACGTGACTACAGGCAGTCCAGTAACATGAAATCTCCTGGTTACCAAAGTCGGCACATTCTCTTACGTCCAACAATGCAGACTTTAATTTGTGATGTACATTCAATAACAAGTGATAACCACAAATGGACCCAGGAAGACAAACTTTTGCTTGAGAGCCAGCTCATCCTAGCTACAGCTGAACCACTCTGTCTTGATCCTTCTATAGCAGTCACCTGCACTGCAAACAGACTGCTCTATAACAAGCAAAAGATGAACACTCGCCCAATGAAACGGTGTTTCAAGAGGTATTCCAGATCCTCTCTGAATCGGCAGCAAGATCTATCTCATTGTCCACCTCCTCCTCAGCTGAGGTTACTTGATTTCTTACAAAAAAGAAAGGAAAGAAAAGCAGGTCAGCATTATGACCTCAAAATTTCTAAGGCAGGAAATTGTGTAGATATGTGGAAACGGAGTCCCTGTAATTTGGCCATACCTTCTGAAGTAGATGTGGAGAAATATGCTAAAGTGGAAAAGTCTATCAAATCTGATGACTCACAGCCAACAGTCTGGCCAGCCCATGATGTAAAAGATGATTATGTATTTGAATGTGAAGCTGGTACTCAGTATCAGAAAACAAAGCTGACCATCTTGCAGTCGCTTGGAGATCCACTTTACTATGGTAAAATACAGCCATGTAAAGCAGATGAAGAAAGTGACAGCCAGATGTCTCCATCACACTCGTCCACAGATGATCATTCAAATTGGTTCATTATTGGATCAAAGACCGATGCTGAGAGGGTAGTCAATCAGTACCAAGAATTAGTCCAGAATGAAGCCAAATGTCCGGTCAAGATGTCACACAGCTCCAGTGGCTCAGCCAGTCTGAGTCAGGTTTCTCCAGGGAAAGAAACAGATCAAACTGAAACCGTGTCAGTTCAGTCTTCGGTATTGGGGAAGGGTGTAAAACATCGACCCCCACCAATCAAACTTCCCTCAAGCTCAGGAAATAGTTCCTCAGGTAACTATTTTACACCACAACAGACAAGCAGCTTTCTCAAATCTCCAACTCCTCCTCCTTCTTCTAAGCCATCAAGTATTCCTCGGAAATCATCTGTGGATCTCAATCAAGTTAGCATGCTTTCTCCAGCTGCCCTATCACCTGCCAGCTCATCACAAAGAACCACGGCCACCCAGGTCATGGCAAACTCTGCTGGACTTAACTTCATCAATGTAGTGGGCTCTGTTTGTGGGGCCCAGGCTTTGATGAGTGGTTCAAACCCCATGCTGGGCTGTAACACTGGTGCCATAACTCCTGCAGGAATAAACCTGAGCGGCCTTCTACCCTCAGGAGGTCTGCTACCAAATGCACTGCCCAGTGCAATGCAGGCAGCTTCTCAAGCAGGTGTTCCATTTGGTTTAAAAAATACTTCAAGTCTCAGGCCCTTAAATCTACTCCAGCTTCCAGGTGGTTCACTTATTTTTAACACTCTGCAGCAGCAGCAACAGCAGCTCTCCCAGTTTACACCACAACAACCTCAGCAGCCCACAACTTGTAGTCCTCAACAGCCAGGGGAGCAGGGTTCTGAGCAAGGTTCAACCAGTCAAGAACAGGCCTTATCTGCTCAGCAAGCTGCTGTTATTAACCTTACTGGAGTAGGAAGTTTTATGCAGTCACAGGCAGCTGTGTTGTCTCAGCTTGGCTCTGCCGAGAACAGACCTGAGCAAAGCCTTCCTCAGCAGAGATTCCAGCTCTCCTCTGCCTTTCAACAGCAGCAGCAACAGATACAACAGTTGCGATTCTTGCAGCATCAAATGGCTATGGCAGCAGCAGCAGCACAAACAGCTCAGCTACATCATCATCGGCATACAGGCAGCCAGTCAAAAAGTAAAATGAAGAGAGGCACGCCAACCACTCCAAAATTTTGA
Amino sequence
MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCNLAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGTQYQKTKLTILQSLGDPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKHRPPPIKLPSSSGNSSSGNYFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLSPAALSPASSSQRTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTCSPQQPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAVLSQLGSAENRPEQSLPQQRFQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHHHRHTGSQSKSKMKRGTPTTPKF*