ENST00000379599.6 NHLRC3
Information
- Transcript ID
- ENST00000379599.6
- Genome
- hg19
- Position
- chr13:39,612,528-39,624,246
- Strand
- +
- CDS length
- 843
- Amino acid length
- 281
- Gene symbol
- NHLRC3
- Gene type
- protein-coding
- Gene description
- NHL repeat containing 3
- Gene Entrez Gene ID
- 387921
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 39,612,528 | 39,612,860 |
| 2 | 39,613,273 | 39,613,425 |
| 3 | 39,613,701 | 39,613,848 |
| 4 | 39,618,227 | 39,618,318 |
| 5 | 39,621,177 | 39,621,289 |
| 6 | 39,621,811 | 39,624,246 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 39,612,777 | 39,612,860 |
| 2 | CDS | 39,613,273 | 39,613,425 |
| 3 | CDS | 39,613,701 | 39,613,848 |
| 4 | CDS | 39,618,227 | 39,618,318 |
| 5 | CDS | 39,621,177 | 39,621,289 |
| 6 | CDS | 39,621,811 | 39,622,063 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr13 | 39,038,391 | 39,050,109 | Link |
CDS sequence
ATGGCGAGATTCTGGGTCTGCGTAGCCGGTGCTGGCTTCTTTCTTGCATTTTTGGTTTTGCATTCGCGTTTTTGTGGCTCTCCAGTTTTGAGGAACTTTACTTTTGCAGTTTCCTGGAGAACTGAGAAAATTCTTTACCGGCTGGATGTGGGTTGGCCTAAGCACCCAGAATATTTTACCGGAACAACATTTTGTGTTGCAGTTGACTCCCTCAATGGATTGGTTTACATAGGTCAAAGAGGGGATAACATCCCAAAGATATTAGTGTTCACAGAGGATGGATATTTCCTACGAGCCTGGAATTATACAGTTGACACACCTCATGGTATATTTGCAGCCAGTACTCTATATGAACAATCCGTCTGGATCACGGATGTAGGAAGTGATTTCATGATCCTTTGGCTGCATGGAGAAAATGGGACAGGGCCTGCTAAGTTCAACATACCTCACAGTGTTACACTTGATTCAGCTGGTCGGGTGTGGGTTGCTGACCGAGGAAATAAAAGAATCCAAGTATTTGATAAAGACACTGGGGAGTGGTTAGGAGCATGGAATAATTGTTTCACAGAAGAGGGACCTTCTTCAGTCAGGTTTACTCCTGATGGGAAGTACTTGATTGTGGCCCAGCTGAATCTTAGCAGGCTCTCAGTCGTAGCAGCACCCCCAGTGGGAAGCATTGGGGAGTGTTCTGTGATCAGCACAATCCAACTAGCAGATCAAGTTTTGCCACATCTCCTAGAAGTCGACAGAAAGACTGGAGCAGTCTATGTAGCAGAAATTGGAGCAAAACAAGTACAAAAATATGTCCCTTTGAATAGCTATGTTCCTTCATTTGGTTCATAA
Amino sequence
MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKILYRLDVGWPKHPEYFTGTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQSVWITDVGSDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS*