ENST00000648254.1 THSD1

Information
Transcript ID
ENST00000648254.1
Genome
hg19
Position
chr13:52,951,334-52,990,508
Strand
-
CDS length
2,400
Amino acid length
800
Gene symbol
THSD1
Gene type
protein-coding
Gene description
thrombospondin type 1 domain containing 1
Gene Entrez Gene ID
55901
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 52,951,334 52,952,924
3 52,971,367 52,972,329
2 52,976,678 52,976,816
1 52,990,152 52,990,508
CDS
Exon number Type Start Stop
4 CDS 52,951,546 52,952,924
3 CDS 52,971,367 52,972,329
2 CDS 52,976,678 52,976,735
Other genome
Genome Chromosome Start End Links
hg38 chr13 52,377,199 52,416,373 Link
CDS sequence
ATGAAACCAATGTTGAAAGACTTTTCAAATCTATTGTTGGTGGTACTCTGTGACTATGTTCTTGGAGAAGCTGAATATCTTCTCTTGAGAGAGCCAGGCCATGTAGCACTAAGCAACGACACAGTGTATGTGGATTTCCAGTATTTTGATGGTGCTAATGGGACACTGAGGAATGTATCTGTCCTGCTGTTGGAGGCCAACACCAATCAGACTGTAACTACCAAGTACCTCCTGACCAACCAGTCCCAGGGAACACTAAAGTTTGAGTGCTTCTATTTCAAGGAGGCTGGTGACTACTGGTTCACAATGACTCCAGAAGCAACAGACAACAGCACTCCATTCCCCTGGTGGGAGAAAAGTGCCTTTCTGAAGGTGGAATGGCCTGTCTTTCACGTTGACTTGAATAGGAGTGCCAAGGCAGCAGAAGGCACCTTCCAAGTGGGCCTATTTACCAGTCAACCACTGTGCCCGTTTCCTGTGGACAAGCCCAACATCGTAGTGGATGTCATCTTCACCAACAGTCTTCCTGAGGCAAGAAGAAATTCAAGACAGCCGCTGGAAATAAGAACCAGCAAAAGGACAGAACTTGCTCAAGGTCAGTGGGTTGAGTTTGGCTGTGCACCCTTGGGGCCAGAAGCCTATGTCACCGTGGTGCTGAAGCTGCTTGGGCGAGACTCAGTCATTACCTCCACAGGACCCATTGACCTGGCCCAGAAATTTGGATACAAACTGGTGATGGTGCCAGAACTCACATGTGAGTCCGGGGTAGAGGTGACAGTGCTGCCTCCACCATGCACCTTCGTCCAAGGAGTGGTCACTGTCTTCAAGGAGGCCCCCAGATACCCTGGGAAGAGGACCATTCACTTGGCTGAAAACAGCCTGCCCCTGGGAGAGAGGAGGACAATTTTTAACTGTACTTTGTTTGACATGGGGAAGAATAAGTACTGCTTTGACTTTGGCATTTCAAGCAGAAGCCATTTTTCTGCAAAGGAGGAGTGCATGCTAATTCAGAGAAATACAGCTTTCCAGCCATCCAGCCCATCTCCTCTTCAGCCCCAGGGTCCAGTGAAGTCCAACAACATCGTGACTGTCACTGGTATATCCTTGTGCTTGTTCATCATCATTGCCACTGTGCTCATCACGCTGTGGAGGAGGTTCGGCCGGCCAGCCAAGTGCAGCACACCTGCTCGACACAACTCCATCCACTCCCCCAGCTTCCGGAAGAACTCGGACGAGGAGAATATCTGCGAGCTGAGCGAGCAGCGCGGGAGCTTCTCGGATGGGGGAGACGGGCCCACGGGGAGTCCAGGGGACACAGGCATCCCTCTGACCTACAGGCGGAGCGGGCCGGTACCTCCCGAGGATGATGCCTCTGGCAGCGAGAGCTTCCAGTCCAACGCCCAGAAGATAATCCCACCTCTGTTCAGCTACCGCCTTGCCCAGCAGCAGTTAAAGGAGATGAAAAAGAAAGGTCTGACGGAAACTACCAAAGTGTATCACGTGTCTCAGAGTCCCCTGACAGACACTGCCATTGATGCGGCCCCCAGCGCTCCCTTAGATTTGGAAAGCCCGGAAGAAGCTGCAGCAAACAAGTTCCGGATCAAATCCCCATTTCCGGAGCAGCCCGCGGTCAGTGCCGGGGAAAGGCCTCCCTCCAGGCTGGATCTAAATGTGACTCAGGCCAGTTGTGCCATAAGCCCCAGCCAGACTCTGATCCGCAAGTCACAGGCAAGGCACGTGGGCAGCAGAGGGGGCCCGTCCGAAAGGAGCCATGCCAGGAACGCCCATTTCAGGAGGACAGCGAGTTTCCATGAAGCCAGGCAGGCCCGGCCGTTCCGAGAGAGGAGCATGTCCACTCTGACTCCACGGCAGGCCCCTGCCTACAGCTCTAGGACGCGGACCTGCGAGCAGGCAGAGGACAGATTTAGGCCTCAGAGTCGAGGTGCCCACCTGTTTCCTGAAAAACTGGAGCATTTCCAAGAGGCAAGTGGAACCCGTGGTCCATTAAACCCTCTCCCTAAATCCTACACTTTGGGGCAGCCCTTGAGGAAACCAGACCTTGGGGATCACCAGGCAGGATTAGTGGCCGGAATTGAGAGAACAGAGCCCCACAGAGCTCGTCGGGGACCGTCCCCCAGTCACAAGAGTGTCTCAAGGAAGCAGTCTTCTCCCATATCCCCCAAAGATAACTACCAGAGGGTCAGTTCTCTGAGCCCTTCTCAGTGTAGAAAAGACAAGTGTCAAAGCTTCCCCACTCACCCTGAGTTTGCCTTCTATGACAATACGTCGTTTGGCCTCACTGAGGCTGAGCAGAGGATGCTGGACCTCCCAGGATATTTTGGGTCAAATGAAGAGGATGAAACCACAAGTACACTTAGCGTGGAGAAGCTGGTGATCTAG
Amino sequence
MKPMLKDFSNLLLVVLCDYVLGEAEYLLLREPGHVALSNDTVYVDFQYFDGANGTLRNVSVLLLEANTNQTVTTKYLLTNQSQGTLKFECFYFKEAGDYWFTMTPEATDNSTPFPWWEKSAFLKVEWPVFHVDLNRSAKAAEGTFQVGLFTSQPLCPFPVDKPNIVVDVIFTNSLPEARRNSRQPLEIRTSKRTELAQGQWVEFGCAPLGPEAYVTVVLKLLGRDSVITSTGPIDLAQKFGYKLVMVPELTCESGVEVTVLPPPCTFVQGVVTVFKEAPRYPGKRTIHLAENSLPLGERRTIFNCTLFDMGKNKYCFDFGISSRSHFSAKEECMLIQRNTAFQPSSPSPLQPQGPVKSNNIVTVTGISLCLFIIIATVLITLWRRFGRPAKCSTPARHNSIHSPSFRKNSDEENICELSEQRGSFSDGGDGPTGSPGDTGIPLTYRRSGPVPPEDDASGSESFQSNAQKIIPPLFSYRLAQQQLKEMKKKGLTETTKVYHVSQSPLTDTAIDAAPSAPLDLESPEEAAANKFRIKSPFPEQPAVSAGERPPSRLDLNVTQASCAISPSQTLIRKSQARHVGSRGGPSERSHARNAHFRRTASFHEARQARPFRERSMSTLTPRQAPAYSSRTRTCEQAEDRFRPQSRGAHLFPEKLEHFQEASGTRGPLNPLPKSYTLGQPLRKPDLGDHQAGLVAGIERTEPHRARRGPSPSHKSVSRKQSSPISPKDNYQRVSSLSPSQCRKDKCQSFPTHPEFAFYDNTSFGLTEAEQRMLDLPGYFGSNEEDETTSTLSVEKLVI*