ENST00000338862.5 PCDH8

Information
Transcript ID
ENST00000338862.5
Genome
hg19
Position
chr13:53,418,114-53,422,776
Strand
-
CDS length
2,922
Amino acid length
974
Gene symbol
PCDH8
Gene type
protein-coding
Gene description
protocadherin 8
Gene Entrez Gene ID
5100
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 53,418,114 53,419,068
2 53,419,560 53,419,767
1 53,420,232 53,422,776
CDS
Exon number Type Start Stop
3 CDS 53,418,695 53,419,068
2 CDS 53,419,560 53,419,767
1 CDS 53,420,232 53,422,571
Other genome
Genome Chromosome Start End Links
hg38 chr13 52,843,979 52,848,641 Link
CDS sequence
ATGAGTCCTGTGAGGCGTTGGGGCAGCCCCTGCCTTTTCCCCTTGCAGCTCTTCAGCCTCTGCTGGGTGCTCTCAGTGGCCCAGAGCAAAACAGTCCGATACAGCACCTTCGAGGAGGATGCCCCCGGCACGGTCATCGGGACCCTGGCCGAGGACCTGCATATGAAAGTATCGGGTGACACAAGCTTCCGCCTGATGAAGCAATTCAACAGCTCTCTGCTCCGGGTGCGCGAAGGCGACGGGCAGCTGACCGTCGGGGACGCCGGCCTGGACCGCGAGCGGCTGTGTGGCCAGGCCCCGCAGTGCGTGCTGGCCTTCGATGTGGTCAGCTTCTCGCAGGAGCAGTTCCGGCTGGTGCACGTGGAGGTAGAGGTGAGGGACGTCAACGACCACGCGCCGCGCTTCCCCAGGGCCCAGATCCCGGTAGAGGTGTCCGAGGGTGCGGCAGTGGGCACGCGCATCCCCTTGGAGGTGCCGGTGGACGAGGACGTGGGCGCCAACGGGCTGCAGACCGTGCGCCTGGCCGAGCCGCACAGCCCCTTTCGCGTGGAGCTGCAGACGCGAGCGGACGGCGCTCAGTGCGCAGACCTGGTGCTGCTGCAGGAGCTGGACCGCGAGAGCCAGGCCGCCTACAGCCTGGAGCTGGTGGCCCAGGACGGCGGCCGCCCGCCGCGCTCCGCCACGGCTGCCCTCAGCGTGCGCGTCCTGGATGCGAATGACCACAGCCCGGCCTTCCCGCAGGGCGCCGTGGCCGAAGTGGAGCTGGCGGAAGACGCGCCCGTGGGCTCCCTGCTTCTCGACCTGGACGCAGCCGACCCCGACGAGGGACCTAACGGCGACGTGGTGTTCGCATTTGGCGCCCGCACCCCGCCGGAGGCGCGCCGCCTCTTTCGGCTTGACCCGCGATCAGGCCGCCTCACCCTGGCCGGGCCCGTGGACTACGAGCGTCAGGACACCTACGAGCTGGACGTGCGGGCGCAGGACCGCGGACCCGGGCCCCGCGCTGCCACCTGCAAGGTCATCGTGCGCATCCGAGACGTCAATGACAACGCACCCGACATCGCCATCACCCCGCTGGCCGCCCCAGGCGCGCCGGCAACCTCACCCTTCGCCGCTGCCGCCGCCGCCGCTGCACTCGGGGGAGCGGACGCTAGCTCGCCGGCGGGAGCCGGGACGCCGGAGGCTGGTGCCACTTCGCTGGTGCCGGAGGGGGCGGCGCGCGAGAGCCTGGTGGCCCTGGTCAGCACCTCGGACAGGGACTCGGGCGCCAACGGGCAAGTGCGCTGCGCCCTCTATGGGCACGAGCACTTCCGGCTGCAGCCGGCCTACGCGGGCAGCTACCTGGTGGTGACCGCGGCGTCGCTGGACCGCGAACGCATCGCCGAGTACAACTTGACGCTGGTGGCCGAGGATCGCGGCGCGCCCCCGCTGCGCACAGTGCGGCCCTACACGGTGCGTGTGGGCGACGAGAACGACAACGCGCCGCTCTTCACGCGGCCGGTCTATGAGGTGTCGGTGCGCGAGAACAACCCGCCAGGCGCCTACCTGGCCACGGTGGCCGCCCGCGACCGGGACCTGGGCCGCAACGGCCAGGTCACCTACCGGCTGCTGGAGGCCGAGGTGGGCCGCGCCGGGGGCGCCGTGTCCACTTATGTCTCGGTGGACCCAGCTACCGGAGCCATCTACGCGCTGCGCAGCTTCGACTATGAGACGCTGCGCCAACTCGACGTTCGCATCCAAGCTAGCGACGGCGGCTCCCCTCAGCTTTCCAGCAGCGCCCTAGTGCAAGTGCGCGTGCTGGACCAGAACGACCATGCGCCAGTCCTGGTGCACCCGGCGCCAGCCAATGGCTCCCTAGAAGTGGCGGTGCCTGGGCGCACCGCAAAGGACACGGTTGTGGCCCGTGTGCAGGCCCGGGATGCAGACGAGGGAGCCAACGGGGAGCTGGCGTTCGAGCTGCAGCAGCAGGAGCCGCGCGAAGCCTTCGCCATCGGCCGCCGCACGGGGGAGATACTGCTCACCGGCGACCTCTCGCAGGAGCCACCCGGTCGCGTGTTCAGGGCGCTCCTGGTCATATCCGACGGCGGCCGTCCCCCGCTCACCACCACCGCAACTGTCAGCTTCGTGGTAACAGCAGGGGGCGGGCGTGGGCCGGCTGCGCCTGCCAGTGCAGGAAGCCCGGAGCGTTCCCGCCCGCCTGGCTCTCGGCTCGGGGTGTCCGGGTCGGTGCTGCAATGGGACACGCCGCTGATCGTCATCATCGTGCTGGCCGGGAGCTGCACGCTGCTGCTGGCCGCCATCATCGCCATCGCCACCACCTGCAACCGCCGCAAGAAGGAGCCCTACGGTGCCTCCCCGGGTTTTGGAAAGGAGCCGGCGCCCCCTGTGGCGGTGTGGAAAGGACACTCCTTCAACACCATTTCTGGCAGAGAAGCAGAGAAGTTCAGCGGCAAAGACAGCGGTAAAGGGGACAGTGATTTCAACGACAGCGATTCCGACATCAGCGGGGACGCTCTGAAAAAGGATCTCATCAACCACATGCAGAGTGGACTGTGGGCGTGCACCGCTGAGTGTAAGATCCTGGGCCACTCTGACCGCTGCTGGAGCCCATCCTGCAGCGGGCCCAACGCACATCCATCGCCTCACCCACCAGCCCAGATGTCAACCTTCTGTAAGAGCACGTCACTGCCTCGGGATCCTCTGCGCAGGGACAATTACTACCAGGCCCAGCTGCCCAAGACAGTGGGGCTGCAGAGCGTCTATGAGAAAGTACTGCACAGAGACTATGACAGGACAGTCACTCTGCTCTCCCCTCCCCGTCCAGGGAGGCTCCCAGACCTGCAGGAGATTGGAGTACCCCTCTACCAGTCCCCTCCTGGCAGGTACCTGTCCCCGAAGAAGGGAGCCAATGAAAATGTGTAA
Amino sequence
MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGDTSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQTVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLAAPGAPATSPFAAAAAAAALGGADASSPAGAGTPEAGATSLVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDRDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVPGRTAKDTVVARVQARDADEGANGELAFELQQQEPREAFAIGRRTGEILLTGDLSQEPPGRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAAPASAGSPERSRPPGSRLGVSGSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEPYGASPGFGKEPAPPVAVWKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV*