ENST00000554698.5 SDR39U1
Information
- Transcript ID
- ENST00000554698.5
- Genome
- hg19
- Position
- chr14:24,908,991-24,911,900
- Strand
- -
- CDS length
- 558
- Amino acid length
- 186
- Gene symbol
- SDR39U1
- Gene type
- protein-coding
- Gene description
- short chain dehydrogenase/reductase family 39U member 1
- Gene Entrez Gene ID
- 56948
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 24,908,991 | 24,909,698 |
| 3 | 24,909,989 | 24,910,132 |
| 2 | 24,911,304 | 24,911,466 |
| 1 | 24,911,552 | 24,911,900 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 24,909,289 | 24,909,698 |
| 3 | CDS | 24,909,989 | 24,910,132 |
| 2 | CDS | 24,911,304 | 24,911,307 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr14 | 24,439,785 | 24,442,694 | Link |
CDS sequence
ATGGCTTACTACCAGCCCAGTCTGACTGCGGAGTATGATGAAGACAGCCCAGGAGGGGACTTTGACTTTTTCTCCAACCTCGTAACCAAATGGGAAGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTGGTGGTGCGCTCAGGGGTTGTGCTGGGCCGTGGGGGTGGTGCCATGGGCCACATGCTGCTGCCCTTTCGCCTGGGCCTGGGGGGCCCCATCGGCTCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAATGCTGAGTTTGCCCAGACCTTGGGTGCTGCCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGCTGCCTTAAAGGAAATTGTAGCCTAA
Amino sequence
MAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTLGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPQRTLATGYQYSFPELGAALKEIVA*