ENST00000553331.5 PNN
Information
- Transcript ID
- ENST00000553331.5
- Genome
- hg19
- Position
- chr14:39,644,387-39,648,450
- Strand
- +
- CDS length
- 375
- Amino acid length
- 125
- Gene symbol
- PNN
- Gene type
- protein-coding
- Gene description
- pinin, desmosome associated protein
- Gene Entrez Gene ID
- 5411
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 39,644,387 | 39,644,596 |
| 2 | 39,645,282 | 39,645,353 |
| 3 | 39,645,731 | 39,645,799 |
| 4 | 39,646,616 | 39,646,688 |
| 5 | 39,647,045 | 39,647,120 |
| 6 | 39,648,295 | 39,648,450 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 39,644,484 | 39,644,596 |
| 2 | CDS | 39,645,282 | 39,645,353 |
| 3 | CDS | 39,645,731 | 39,645,799 |
| 4 | CDS | 39,646,616 | 39,646,688 |
| 5 | CDS | 39,647,045 | 39,647,092 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr14 | 39,175,183 | 39,179,246 | Link |
CDS sequence
ATGGCGGTCGCCGTGAGAACTTTGCAGGAACAGCTGGAAAAGGCCAAAGAGAGTCTTAAGAACGTGGATGAGAACATTCGCAAGCTCACCGGGCGGGATCCGAATGACGTGAGGCCCATCCAAGCCAGATTGCTGGCCCTTTCTGGTCCTGGTGGAGGTAGAGGACGTGGTAGTTTATTACTGAGGCGTGGATTCTCAGATAGTGGAGGAGGACCCCCAGCCAAACAGAGAGACCTTGAAGGGGCAGTCAGTAGGCTGGGCGGGGAGCGTCGGACCAGAAGAGAATCACGCCAGGAAAGCGACCCGGAGGATGATGATGTTAAAAAGGAACCGGCGAATATTTGGCTTGTTGATGGGTACCCTTCAAAAATTTAA
Amino sequence
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKEPANIWLVDGYPSKI*