ENST00000487285.5 L3HYPDH
Information
- Transcript ID
- ENST00000487285.5
- Genome
- hg19
- Position
- chr14:59,941,172-59,950,403
- Strand
- -
- CDS length
- 438
- Amino acid length
- 146
- Gene symbol
- L3HYPDH
- Gene type
- protein-coding
- Gene description
- trans-L-3-hydroxyproline dehydratase
- Gene Entrez Gene ID
- 112849
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 59,941,172 | 59,941,244 |
| 4 | 59,942,587 | 59,942,724 |
| 3 | 59,942,810 | 59,942,932 |
| 2 | 59,945,900 | 59,946,069 |
| 1 | 59,950,208 | 59,950,403 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 59,941,233 | 59,941,244 |
| 4 | CDS | 59,942,587 | 59,942,724 |
| 3 | CDS | 59,942,810 | 59,942,932 |
| 2 | CDS | 59,945,900 | 59,946,064 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr14 | 59,474,454 | 59,483,685 | Link |
CDS sequence
ATGGTGGATGTTCCTGGACATGGAAAGGTGATGGTGGACATTGCATATGGCGGTGCATTTTATGCATTTGTTACTGCTGAAAAGTTAGGACTAGACATTTGTTCTGCAAAGACCAGGGACCTTGTGGATGCAGCGAGTGCAGTGACAGAGGCAGTGAAAGCTCAGTTTAAAATTAATCATCCTGATAGTGAAGACCTTGCCTTTTTATATGGAACTATATTAACAGATGGAAAAGATGCTTATACCAAGGAACCAACCACCAACATTTGTGTTTTTGCAGATGAACAGGTTGACAGAAGTCCCACTGGCTCAGGAGTGACAGCCCGAATTGCCTTACAGTATCACAAAGGGCTTCTGGAACTGAACCAGATGAGAGCCTTCAAAAGCAGTGCAACTGGCTCAGTATTCACAGGGAAAGCTGTGAGGGAGCTGTTATGA
Amino sequence
MVDVPGHGKVMVDIAYGGAFYAFVTAEKLGLDICSAKTRDLVDAASAVTEAVKAQFKINHPDSEDLAFLYGTILTDGKDAYTKEPTTNICVFADEQVDRSPTGSGVTARIALQYHKGLLELNQMRAFKSSATGSVFTGKAVRELL*