ENST00000357085.5 TRIM38

Information
Transcript ID
ENST00000357085.5
Genome
hg38
Position
chr6:25,962,802-25,991,231
Strand
+
CDS length
1,398
Amino acid length
466
Gene symbol
TRIM38
Gene type
protein-coding
Gene description
tripartite motif containing 38
Gene Entrez Gene ID
10475
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 25,962,802 25,962,855
2 25,963,049 25,963,282
3 25,966,335 25,966,933
4 25,969,325 25,969,420
5 25,971,869 25,972,099
6 25,973,054 25,973,076
7 25,973,173 25,973,285
8 25,983,164 25,991,231
CDS
Exon number Type Start Stop
3 CDS 25,966,523 25,966,933
4 CDS 25,969,325 25,969,420
5 CDS 25,971,869 25,972,099
6 CDS 25,973,054 25,973,076
7 CDS 25,973,173 25,973,285
8 CDS 25,983,164 25,983,687
Other genome
Genome Chromosome Start End Links
hg19 chr6 25,963,030 25,991,459 Link
CDS sequence
ATGGCCTCAACCACCAGCACCAAGAAGATGATGGAGGAAGCCACCTGCTCCATCTGCCTGAGCCTGATGACGAACCCAGTAAGCATCAACTGTGGACACAGCTACTGCCACTTGTGTATAACAGACTTCTTTAAAAACCCAAGCCAAAAGCAACTGAGGCAGGAGACATTCTGCTGTCCCCAGTGTCGGGCTCCATTTCATATGGATAGCCTCCGACCCAACAAGCAGCTGGGAAGCCTCATTGAAGCCCTCAAAGAGACGGATCAAGAAATGTCATGTGAGGAACACGGAGAGCAGTTCCACCTGTTCTGCGAAGACGAGGGGCAGCTCATCTGCTGGCGCTGTGAGCGGGCACCACAGCACAAAGGGCACACCACAGCTCTTGTTGAAGACGTATGCCAGGGCTACAAGGAAAAGCTCCAGAAAGCTGTGACAAAACTGAAGCAACTTGAAGACAGATGTACGGAGCAGAAGCTGTCCACAGCAATGCGAATAACTAAATGGAAAGAGAAGGTACAGATTCAGAGACAAAAAATCCGGTCTGACTTTAAGAATCTCCAGTGTTTCCTACATGAGGAAGAGAAGTCTTATCTCTGGAGGCTGGAGAAAGAAGAACAACAGACTCTGAGTAGACTGAGGGACTATGAGGCTGGTCTGGGGCTGAAGAGCAATGAACTCAAGAGCCACATCCTGGAACTGGAGGAAAAATGTCAGGGCTCAGCCCAGAAATTGCTGCAGAATGTGAATGACACTTTGAGCAGGAGTTGGGCTGTGAAGCTGGAAACATCAGAGGCTGTCTCCTTGGAACTTCATACTATGTGCAATGTTTCCAAGCTTTACTTCGATGTGAAGAAAATGTTAAGGAGTCATCAAGTTAGTGTGACTCTGGATCCAGATACAGCTCATCACGAACTAATTCTCTCTGAGGATCGGAGACAAGTGACTCGTGGATACACCCAGGAGAATCAGGACACATCTTCCAGGAGATTTACTGCCTTCCCCTGTGTCTTGGGTTGTGAAGGCTTCACCTCAGGAAGACGTTACTTTGAAGTGGATGTTGGCGAAGGAACCGGATGGGATTTAGGAGTTTGTATGGAAAATGTGCAGAGGGGCACTGGCATGAAGCAAGAGCCTCAGTCTGGATTCTGGACCCTCAGGCTGTGCAAAAAGAAAGGCTATGTAGCACTTACTTCTCCCCCAACTTCCCTTCATCTGCATGAGCAGCCCCTGCTTGTGGGAATTTTTCTGGACTATGAGGCCGGAGTTGTATCCTTTTATAACGGGAATACTGGCTGCCACATCTTTACTTTCCCGAAGGCTTCCTTCTCTGATACTCTCCGGCCCTATTTCCAGGTTTATCAATATTCTCCTTTGTTTCTGCCTCCCCCAGGTGACTAA
Amino sequence
MASTTSTKKMMEEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDSLRPNKQLGSLIEALKETDQEMSCEEHGEQFHLFCEDEGQLICWRCERAPQHKGHTTALVEDVCQGYKEKLQKAVTKLKQLEDRCTEQKLSTAMRITKWKEKVQIQRQKIRSDFKNLQCFLHEEEKSYLWRLEKEEQQTLSRLRDYEAGLGLKSNELKSHILELEEKCQGSAQKLLQNVNDTLSRSWAVKLETSEAVSLELHTMCNVSKLYFDVKKMLRSHQVSVTLDPDTAHHELILSEDRRQVTRGYTQENQDTSSRRFTAFPCVLGCEGFTSGRRYFEVDVGEGTGWDLGVCMENVQRGTGMKQEPQSGFWTLRLCKKKGYVALTSPPTSLHLHEQPLLVGIFLDYEAGVVSFYNGNTGCHIFTFPKASFSDTLRPYFQVYQYSPLFLPPPGD*