ENST00000447653.8 CALM1
Information
- Transcript ID
- ENST00000447653.8
- Genome
- hg19
- Position
- chr14:90,863,373-90,871,416
- Strand
- +
- CDS length
- 342
- Amino acid length
- 114
- Gene symbol
- CALM1
- Gene type
- protein-coding
- Gene description
- calmodulin 1
- Gene Entrez Gene ID
- 801
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 90,863,373 | 90,863,577 |
2 | 90,865,335 | 90,865,431 |
3 | 90,866,409 | 90,866,439 |
4 | 90,867,603 | 90,867,746 |
5 | 90,870,206 | 90,870,312 |
6 | 90,870,723 | 90,870,858 |
7 | 90,871,033 | 90,871,416 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
4 | CDS | 90,867,677 | 90,867,746 |
5 | CDS | 90,870,206 | 90,870,312 |
6 | CDS | 90,870,723 | 90,870,858 |
7 | CDS | 90,871,033 | 90,871,061 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr14 | 90,397,029 | 90,405,072 | Link |
CDS sequence
ATGAGGTCACTGGGTCAGAACCCAACAGAAGCTGAATTGCAGGATATGATCAATGAAGTGGATGCTGATGGTAATGGCACCATTGACTTCCCCGAATTTTTGACTATGATGGCTAGAAAAATGAAAGATACAGATAGTGAAGAAGAAATCCGTGAGGCATTCCGAGTCTTTGACAAGGATGGCAATGGTTATATCAGTGCAGCAGAACTACGTCACGTCATGACAAACTTAGGAGAAAAACTAACAGATGAAGAAGTAGATGAAATGATCAGAGAAGCAGATATTGATGGAGACGGACAAGTCAACTATGAAGAATTCGTACAGATGATGACTGCAAAATGA
Amino sequence
MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK*