ENST00000263187.4 MSH4
Information
- Transcript ID
- ENST00000263187.4
- Genome
- hg38
- Position
- chr1:75,796,882-75,913,242
- Strand
- +
- CDS length
- 2,811
- Amino acid length
- 937
- Gene symbol
- MSH4
- Gene type
- protein-coding
- Gene description
- mutS homolog 4
- Gene Entrez Gene ID
- 4438
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 75,796,882 | 75,797,229 |
| 2 | 75,803,731 | 75,803,913 |
| 3 | 75,806,981 | 75,807,141 |
| 4 | 75,810,697 | 75,810,807 |
| 5 | 75,815,021 | 75,815,136 |
| 6 | 75,816,373 | 75,816,546 |
| 7 | 75,822,409 | 75,822,581 |
| 8 | 75,848,209 | 75,848,276 |
| 9 | 75,867,514 | 75,867,588 |
| 10 | 75,876,936 | 75,877,000 |
| 11 | 75,878,149 | 75,878,318 |
| 12 | 75,878,992 | 75,879,128 |
| 13 | 75,880,050 | 75,880,153 |
| 14 | 75,881,246 | 75,881,370 |
| 15 | 75,883,621 | 75,883,821 |
| 16 | 75,889,251 | 75,889,369 |
| 17 | 75,890,696 | 75,890,824 |
| 18 | 75,897,907 | 75,898,081 |
| 19 | 75,899,618 | 75,899,706 |
| 20 | 75,912,696 | 75,913,242 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 75,796,986 | 75,797,229 |
| 2 | CDS | 75,803,731 | 75,803,913 |
| 3 | CDS | 75,806,981 | 75,807,141 |
| 4 | CDS | 75,810,697 | 75,810,807 |
| 5 | CDS | 75,815,021 | 75,815,136 |
| 6 | CDS | 75,816,373 | 75,816,546 |
| 7 | CDS | 75,822,409 | 75,822,581 |
| 8 | CDS | 75,848,209 | 75,848,276 |
| 9 | CDS | 75,867,514 | 75,867,588 |
| 10 | CDS | 75,876,936 | 75,877,000 |
| 11 | CDS | 75,878,149 | 75,878,318 |
| 12 | CDS | 75,878,992 | 75,879,128 |
| 13 | CDS | 75,880,050 | 75,880,153 |
| 14 | CDS | 75,881,246 | 75,881,370 |
| 15 | CDS | 75,883,621 | 75,883,821 |
| 16 | CDS | 75,889,251 | 75,889,369 |
| 17 | CDS | 75,890,696 | 75,890,824 |
| 18 | CDS | 75,897,907 | 75,898,081 |
| 19 | CDS | 75,899,618 | 75,899,706 |
| 20 | CDS | 75,912,696 | 75,912,887 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr1 | 76,262,567 | 76,378,927 | Link |
CDS sequence
ATGCTGAGGCCTGAGATCTCATCAACCTCGCCTTCTGCCCCGGCGGTTTCCCCGTCGTCGGGAGAAACCCGCTCACCTCAGGGTCCCCGCTACAATTTCGGACTCCAGGAGACTCCACAGAGCCGCCCTTCGGTCCAGGTGGTCTCTGCATCCACCTGTCCTGGCACGTCAGGAGCTGCGGGCGACCGGAGCAGCAGCAGCAGCAGCCTTCCCTGCCCCGCGCCAAACTCCCGGCCAGCTCAAGGTTCATACTTTGGAAACAAAAGAGCTTATGCAGAAAACACAGTTGCATCAAATTTTACTTTTGGTGCAAGCTCATCTTCTGCACGAGATACTAATTATCCTCAAACACTTAAAACTCCATTGTCTACTGGAAATCCTCAGAGATCAGGTTATAAGAGCTGGACACCACAAGTGGGATATTCAGCTTCATCCTCATCTGCGATTTCTGCACACTCCCCATCAGTTATTGTAGCTGTTGTAGAAGGGAGAGGACTTGCCAGAGGTGAAATAGGAATGGCAAGTATTGATTTAAAAAACCCCCAAATTATACTATCCCAGTTTGCAGACAACACAACATATGCAAAGGTGATCACTAAACTTAAAATTTTATCACCTTTGGAAATAATAATGTCAAATACTGCTTGTGCTGTGGGGAATTCCACCAAGTTGTTCACTCTGATCACAGAAAATTTCAAGAATGTTAATTTCACTACTATCCAAAGGAAATACTTCAATGAAACAAAAGGATTAGAGTACATTGAACAGTTATGCATAGCAGAATTCAGCACTGTCCTAATGGAGGTTCAGTCCAAGTATTACTGCCTTGCAGCTGTTGCAGCTTTGTTAAAATATGTTGAATTTATTCAAAATTCAGTTTATGCACCAAAATCACTGAAGATTTGTTTCCAGGGTAGTGAACAGACAGCCATGATAGATTCATCATCAGCCCAAAACCTTGAATTGTTAATTAATAATCAAGACTATAGGAATAATCACACTCTCTTTGGTGTTCTAAATTATACTAAGACTCCTGGAGGGAGTAGACGACTTCGTTCTAATATATTAGAGCCTCTAGTTGATATTGAAACCATTAACATGAGATTAGATTGTGTTCAAGAACTACTTCAAGATGAGGAACTATTTTTTGGACTTCAATCAGTTATATCAAGATTTCTTGATACAGAGCAGCTTCTTTCTGTTTTAGTCCAAATTCCAAAGCAAGACACGGTCAATGCTGCTGAATCAAAGATAACAAATTTAATATACTTAAAACATACCTTGGAACTTGTGGATCCTTTAAAGATTGCTATGAAGAACTGTAACACACCTTTATTAAGAGCTTACTATGGTTCCTTGGAAGACAAGAGGTTTGGAATCATACTTGAAAAGATTAAAACAGTAATTAATGATGATGCAAGATACATGAAAGGATGCCTAAACATGAGGACTCAGAAGTGCTATGCAGTGAGGTCTAACATAAATGAATTTCTTGACATAGCAAGAAGAACATACACAGAGATTGTAGATGACATAGCAGGAATGATATCACAACTTGGAGAAAAATATAGTCTACCTTTAAGGACAAGTTTTAGCTCTGCTCGAGGATTTTTCATCCAGATGACTACAGATTGTATAGCCCTACCTAGTGATCAACTTCCTTCAGAATTTATTAAGATTTCTAAAGTGAAAAATTCTTACAGCTTTACATCAGCAGATTTAATTAAAATGAATGAAAGATGCCAAGAATCTTTGAGAGAAATCTATCACATGACTTATATGATAGTGTGCAAACTGCTTAGTGAGATTTATGAACATATTCATTGCTTATATAAACTATCTGACACTGTGTCAATGCTGGATATGCTACTGTCATTTGCTCATGCCTGCACTCTTTCTGACTATGTTCGACCAGAATTTACTGATACTTTAGCAATCAAACAGGGATGGCATCCTATTCTTGAAAAAATATCTGCGGAAAAACCTATTGCCAACAATACCTATGTTACAGAAGGGAGTAATTTTTTGATCATAACTGGACCAAACATGAGTGGAAAATCCACATATTTAAAACAGATTGCTCTTTGTCAGATTATGGCCCAGATTGGATCATATGTTCCAGCAGAATATTCTTCCTTTAGAATTGCTAAACAGATTTTTACAAGAATTAGTACTGATGATGATATCGAAACAAATTCATCAACATTTATGAAAGAAATGAAAGAGATAGCATATATTCTACATAATGCTAATGACAAATCGCTCATATTAATTGATGAACTTGGCAGAGGTACTAATACGGAAGAAGGTATTGGCATTTGTTATGCTGTTTGTGAATATCTACTGAGCTTAAAGGCATTTACACTGTTTGCTACACATTTCCTGGAACTATGCCATATTGATGCCCTGTATCCTAATGTAGAAAACATGCATTTTGAAGTTCAACATGTAAAGAATACCTCAAGAAATAAAGAAGCAATTTTGTATACCTACAAACTTTCTAAGGGACTCACAGAAGAGAAAAATTATGGATTAAAAGCTGCAGAGGTGTCATCACTTCCACCATCAATTGTCTTGGATGCCAAGGAAATCACAACTCAAATTACGAGACAAATTTTGCAAAACCAAAGGAGTACCCCTGAGATGGAAAGACAGAGAGCTGTGTACCATCTAGCCACTAGGCTTGTTCAAACTGCTCGAAACTCTCAATTGGATCCAGACAGTTTACGAATATATTTAAGTAACCTCAAGAAGAAGTACAAAGAAGATTTTCCCAGGACTGAACAAGTTCCAGAAAAGACTGAAGAATAA
Amino sequence
MLRPEISSTSPSAPAVSPSSGETRSPQGPRYNFGLQETPQSRPSVQVVSASTCPGTSGAAGDRSSSSSSLPCPAPNSRPAQGSYFGNKRAYAENTVASNFTFGASSSSARDTNYPQTLKTPLSTGNPQRSGYKSWTPQVGYSASSSSAISAHSPSVIVAVVEGRGLARGEIGMASIDLKNPQIILSQFADNTTYAKVITKLKILSPLEIIMSNTACAVGNSTKLFTLITENFKNVNFTTIQRKYFNETKGLEYIEQLCIAEFSTVLMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKICFQGSEQTAMIDSSSAQNLELLINNQDYRNNHTLFGVLNYTKTPGGSRRLRSNILEPLVDIETINMRLDCVQELLQDEELFFGLQSVISRFLDTEQLLSVLVQIPKQDTVNAAESKITNLIYLKHTLELVDPLKIAMKNCNTPLLRAYYGSLEDKRFGIILEKIKTVINDDARYMKGCLNMRTQKCYAVRSNINEFLDIARRTYTEIVDDIAGMISQLGEKYSLPLRTSFSSARGFFIQMTTDCIALPSDQLPSEFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMTYMIVCKLLSEIYEHIHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKISAEKPIANNTYVTEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAKQIFTRISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGICYAVCEYLLSLKAFTLFATHFLELCHIDALYPNVENMHFEVQHVKNTSRNKEAILYTYKLSKGLTEEKNYGLKAAEVSSLPPSIVLDAKEITTQITRQILQNQRSTPEMERQRAVYHLATRLVQTARNSQLDPDSLRIYLSNLKKKYKEDFPRTEQVPEKTEE*