ENST00000570200.5 ATXN2L

Information
Transcript ID
ENST00000570200.5
Genome
hg19
Position
chr16:28,834,573-28,848,536
Strand
+
CDS length
3,189
Amino acid length
1,063
Gene symbol
ATXN2L
Gene type
protein-coding
Gene description
ataxin 2 like
Gene Entrez Gene ID
11273
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 28,834,573 28,834,879
2 28,836,687 28,836,723
3 28,836,945 28,837,001
4 28,837,091 28,837,162
5 28,837,561 28,837,711
6 28,838,183 28,838,307
7 28,840,722 28,840,813
8 28,841,179 28,841,379
9 28,841,936 28,842,111
10 28,842,283 28,842,393
11 28,843,526 28,843,720
12 28,843,817 28,843,888
13 28,844,138 28,844,208
14 28,844,380 28,844,675
15 28,844,760 28,844,829
16 28,845,386 28,845,532
17 28,845,664 28,845,736
18 28,845,827 28,846,014
19 28,846,379 28,846,508
20 28,846,599 28,846,720
21 28,846,870 28,847,079
22 28,847,254 28,847,497
23 28,848,049 28,848,536
CDS
Exon number Type Start Stop
1 CDS 28,834,581 28,834,879
2 CDS 28,836,687 28,836,723
3 CDS 28,836,945 28,837,001
4 CDS 28,837,091 28,837,162
5 CDS 28,837,561 28,837,711
6 CDS 28,838,183 28,838,307
7 CDS 28,840,722 28,840,813
8 CDS 28,841,179 28,841,379
9 CDS 28,841,936 28,842,111
10 CDS 28,842,283 28,842,393
11 CDS 28,843,526 28,843,720
12 CDS 28,843,817 28,843,888
13 CDS 28,844,138 28,844,208
14 CDS 28,844,380 28,844,675
15 CDS 28,844,760 28,844,829
16 CDS 28,845,386 28,845,532
17 CDS 28,845,664 28,845,736
18 CDS 28,845,827 28,846,014
19 CDS 28,846,379 28,846,508
20 CDS 28,846,599 28,846,720
21 CDS 28,846,870 28,847,079
22 CDS 28,847,254 28,847,497
23 CDS 28,848,049 28,848,098
Other genome
Genome Chromosome Start End Links
hg38 chr16 28,823,252 28,837,215 Link
CDS sequence
ATGTTGAAGCCTCAGCCGCTACAACAGCCCTCCCAGCCCCAGCAGCCGCCCCCCACGCAACAGGCCGTGGCCCGTCGGCCCCCCGGGGGCACCAGCCCTCCCAACGGCGGCCTCCCGGGGCCGCTGGCCACCTCTGCGGCTCCTCCCGGGCCTCCAGCGGCCGCCTCCCCCTGCCTGGGGCCTGTGGCCGCTGCCGGGAGCGGGCTCCGCCGGGGAGCCGAAGGCATCTTGGCGCCGCAGCCGCCGCCGCCGCAGCAACACCAGGAGAGGCCGGGGGCAGCCGCCATCGGCAGCGCCAGGGGACAGAGCACAGGAAAGGGACCCCCACAGTCACCTGTGTTTGAAGGCGTCTACAACAATTCCAGAATGCTGCATTTCCTTACAGCTGTTGTGGGCTCCACTTGTGATGTAAAGGTGAAAAATGGTACCACTTATGAGGGTATCTTCAAGACGCTAAGCTCAAAGTTTGAACTAGCCGTGGATGCTGTGCACCGGAAAGCATCTGAGCCAGCAGGTGGCCCTCGTCGGGAGGACATTGTGGACACCATGGTGTTTAAGCCAAGTGATGTCATGCTTGTTCACTTCCGAAATGTTGACTTCAACTATGCTACTAAAGACAAGTTCACCGATTCAGCCATTGCCATGAACTCGAAAGTGAATGGGGAACACAAAGAGAAGGTGCTTCAGCGCTGGGAGGGGGGTGACAGCAACAGCGACGACTATGACCTCGAGTCTGACATGTCCAATGGATGGGACCCCAATGAAATGTTCAAGTTCAATGAGGAGAACTACGGTGTGAAGACTACCTATGATAGCAGTCTTTCTTCTTATACGGTGCCCTTAGAAAAGGACAACTCAGAAGAGTTTCGTCAGCGAGAGCTGCGTGCGGCCCAGTTGGCTCGAGAGATTGAATCAAGCCCCCAGTACCGCCTACGGATCGCCATGGAGAACGACGATGGGCGCACTGAAGAGGAGAAGCACAGTGCAGTCCAGCGGCAGGGCTCAGGGCGGGAGAGCCCCAGCTTGGCATCCAGGGAGGGGAAGTATATCCCTCTGCCTCAACGAGTCCGGGAAGGTCCCCGGGGAGGAGTTCGATGCAGCAGCTCTCGGGGCGGTCGGCCTGGCCTTAGCTCTTTGCCACCTCGTGGCCCTCACCATCTGGACAACAGCAGCCCTGGCCCAGGTTCTGAGGCCCGTGGTATCAATGGAGGCCCTTCCCGCATGTCCCCAAAGGCACAACGGCCTCTGAGAGGTGCCAAGACTCTGTCTTCGCCCAGTAATAGGCCTTCTGGAGAAACTTCTGTTCCACCTCCTCCTGCAGTGGGCCGGATGTATCCCCCGCGTTCTCCCAAGTCTGCTGCCCCTGCCCCAATCTCAGCTTCCTGTCCAGAGCCTCCCATCGGCTCGGCAGTGCCAACCTCTTCAGCCTCCATCCCTGTGACCTCATCAGTCTCAGATCCTGGAGTGGGCTCCATTTCTCCAGCTTCTCCAAAGATCTCCCTGGCCCCCACAGATGTAAAAGAACTCTCTACCAAGGAACCTGGGAGAACTCTGGAGCCCCAGGAGCTGGCTCGGATAGCTGGGAAAGTCCCTGGTCTTCAGAATGAACAGAAACGATTCCAACTGGAAGAACTGAGAAAGTTTGGGGCCCAGTTTAAGCTTCAGCCCAGTAGCTCCCCTGAGAACAGCCTGGATCCTTTTCCTCCCCGGATCTTAAAGGAGGAGCCCAAAGGAAAGGAGAAAGAGGTTGATGGTCTGTTGACTTCAGAGCCCATGGGGTCTCCCGTCTCCTCCAAGACAGAGTCCGTATCGGATAAGGAGGACAAACCACCCCTGGCACCATCAGGAGGCACTGAGGGGCCAGAGCAGCCCCCACCACCTTGTCCAAGCCAAACTGGCAGCCCCCCGGTGGGCCTCATCAAGGGAGAAGACAAAGATGAGGGCCCTGTTGCTGAACAAGTAAAGAAATCAACGTTGAACCCTAATGCTAAGGAGTTCAATCCTACAAAGCCTCTGCTGTCTGTGAATAAATCCACCAGTACCCCAACTTCTCCGGGGCCCCGGACTCATTCAACTCCCTCCATCCCGGTGCTGACAGCAGGCCAGAGTGGGCTATACAGCCCCCAGTACATCTCCTACATACCTCAGATCCACATGGGACCAGCTGTGCAGGCACCTCAGATGTATCCATATCCTGTATCCAATTCAGTGCCTGGGCAGCAGGGCAAGTACCGGGGAGCAAAAGGCTCCCTTCCTCCGCAGCGCTCGGACCAACACCAGCCAGCCTCAGCCCCGCCGATGATGCAGGCCGCCGCGGCTGCTGGCCCGCCTCTGGTGGCTGCCACGCCCTATTCTTCCTACATCCCCTACAACCCTCAGCAGTTCCCAGGCCAGCCAGCCATGATGCAGCCCATGGCCCACTACCCCTCACAGCCGGTGTTTGCCCCCATGCTTCAGAGCAACCCACGCATGCTGACGTCGGGCAGCCATCCCCAGGCCATCGTGTCATCCTCTACCCCTCAGTACCCTTCTGCAGAGCAGCCTACCCCCCAAGCCCTTTATGCCACTGTTCACCAGTCCTACCCACACCATGCCACACAGCTCCATGCCCACCAGCCGCAGCCGGCTACCACGCCTACTGGAAGCCAGCCGCAGTCCCAGCATGCGGCCCCCAGTCCTGTCCAGCATCAGGCGGGGCAGGCCCCACACTTGGGCAGTGGACAGCCACAGCAGAATCTGTACCACCCAGGGGCCCTGACAGGCACGCCGCCCTCTCTGCCACCGGGACCTTCTGCCCAGTCCCCTCAGAGCAGCTTCCCCCAGCCAGCCGCTGTGTATGCCATCCACCACCAGCAGCTGCCCCACGGCTTCACCAACATGGCCCATGTTACCCAGGCCCATGTCCAAACTGGAATCACAGCAGCCCCGCCCCCTCACCCTGGGGCTCCCCACCCGCCCCAGGTGATGCTGCTGCACCCACCCCAGAGTCATGGGGGGCCCCCCCAAGGCGCGGTGCCCCAGAGTGGGGTGCCTGCACTCTCAGCTTCCACACCCTCACCCTACCCCTACATCGGACACCCCCAAGGTGAGCAGCCTGGCCAGGCGCCTGGATTTCCAGGAGGAGCCGATGACAGGATTCTTCAATCTCATCCCTCCCAGCAGCTCCCCTTCCACCCCCCGGGGAACTGA
Amino sequence
MLKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLRRGAEGILAPQPPPPQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNNSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSNRPSGETSVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVSDPGVGSISPASPKISLAPTDVKELSTKEPGRTLEPQELARIAGKVPGLQNEQKRFQLEELRKFGAQFKLQPSSSPENSLDPFPPRILKEEPKGKEKEVDGLLTSEPMGSPVSSKTESVSDKEDKPPLAPSGGTEGPEQPPPPCPSQTGSPPVGLIKGEDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILQSHPSQQLPFHPPGN*