ENST00000330181.10 SLX1B
Information
- Transcript ID
- ENST00000330181.10
- Genome
- hg19
- Position
- chr16:29,465,854-29,469,540
- Strand
- +
- CDS length
- 828
- Amino acid length
- 276
- Gene symbol
- SLX1B
- Gene type
- protein-coding
- Gene description
- SLX1 homolog B, structure-specific endonuclease subunit
- Gene Entrez Gene ID
- 79008
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 29,465,854 | 29,466,251 |
| 2 | 29,466,719 | 29,466,770 |
| 3 | 29,466,865 | 29,467,206 |
| 4 | 29,468,953 | 29,469,080 |
| 5 | 29,469,249 | 29,469,336 |
| 6 | 29,469,416 | 29,469,540 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 29,466,064 | 29,466,251 |
| 2 | CDS | 29,466,719 | 29,466,770 |
| 3 | CDS | 29,466,865 | 29,467,206 |
| 4 | CDS | 29,468,953 | 29,469,080 |
| 5 | CDS | 29,469,249 | 29,469,336 |
| 6 | CDS | 29,469,416 | 29,469,445 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr16 | 29,454,533 | 29,458,219 | Link |
CDS sequence
ATGGGTCCCGCGGGGGTCGCGGCGAGGCCAGGGCGCTTTTTCGGCGTCTACCTGCTCTACTGCCTGAACCCCCGGTACCGGGGCCGCGTCTACGTGGGGTTCACTGTCAACACTGCTCGTCGGGTCCAGCAGCACAATGGGGGCCGCAAAAAAGGCGGGGCCTGGCGGACCAGCGGGCGAGGGCCCTGGGAGATGGTGCTCGTCGTGCACGGCTTCCCGTCCTCCGTGGCCGCCCTTCGGTTTGAGTGGGCTTGGCAGCACCCGCACGCCTCGCGCCGCCTGGCGCACGTGGGGCCTCGCCTGCGAGGAGAGACAGCCTTCGCTTTCCACCTGCGCGTGCTGGCGCACATGCTGCGCGCACCGCCCTGGGCTCGCCTCCCGCTCACGCTGCGCTGGGTGCGCCCAGACCTCCGCCAGGACCTCTGCCTCCCGCCGCCGCCGCACGTGCCTCTGGCCTTCGGGCCTCCACCGCCCCAGGCCCCGGCCCCAAGGCGCCGCGCAGGTCCCTTTGATGACGCGGAGCCTGAGCCAGACCAGGGGGATCCAGGGGCCTGCTGCTCCCTGTGCGCCCAGACCATCCAGGATGAAGAGGGGCCCTTGTGTTGCCCCCACCCTGGCTGCCTGCTAAGGGCCCATGTGATCTGCCTGGCAGAGGAGTTTCTTCAGGAAGAACCAGGGCAGCTTCTGCCCCTAGAGGGCCAATGCCCTTGCTGTGAGAAGTCACTGCTTTGGGGAGACCTGATCTGGCTGTGCCAGATGGACACTGAGAAAGAAGTAGAAGACTCAGAATTAGAAGAGGCACACTGGACAGACCTGCTGGAGACCTGA
Amino sequence
MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGRGPWEMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRAPPWARLPLTLRWVRPDLRQDLCLPPPPHVPLAFGPPPPQAPAPRRRAGPFDDAEPEPDQGDPGACCSLCAQTIQDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEKSLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET*