ENST00000574563.5 SGSM2

Information
Transcript ID
ENST00000574563.5
Genome
hg19
Position
chr17:2,240,916-2,283,969
Strand
+
CDS length
2,964
Amino acid length
988
Gene symbol
SGSM2
Gene type
protein-coding
Gene description
small G protein signaling modulator 2
Gene Entrez Gene ID
9905
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 2,240,916 2,241,039
2 2,246,839 2,246,914
3 2,264,931 2,265,093
4 2,265,403 2,265,564
5 2,266,132 2,266,199
6 2,266,283 2,266,428
7 2,266,759 2,266,893
8 2,267,353 2,267,477
9 2,267,890 2,267,957
10 2,268,191 2,268,351
11 2,268,509 2,268,635
12 2,274,556 2,274,709
13 2,275,484 2,275,548
14 2,275,637 2,275,782
15 2,276,247 2,276,375
16 2,276,625 2,276,807
17 2,278,786 2,279,169
18 2,279,431 2,279,555
19 2,280,027 2,280,109
20 2,280,253 2,280,362
21 2,281,151 2,281,247
22 2,282,330 2,282,497
23 2,283,559 2,283,969
CDS
Exon number Type Start Stop
1 CDS 2,240,983 2,241,039
2 CDS 2,246,839 2,246,914
3 CDS 2,264,931 2,265,093
4 CDS 2,265,403 2,265,564
5 CDS 2,266,132 2,266,199
6 CDS 2,266,283 2,266,428
7 CDS 2,266,759 2,266,893
8 CDS 2,267,353 2,267,477
9 CDS 2,267,890 2,267,957
10 CDS 2,268,191 2,268,351
11 CDS 2,268,509 2,268,635
12 CDS 2,274,556 2,274,709
13 CDS 2,275,484 2,275,548
14 CDS 2,275,637 2,275,782
15 CDS 2,276,247 2,276,375
16 CDS 2,276,625 2,276,807
17 CDS 2,278,786 2,279,169
18 CDS 2,279,431 2,279,555
19 CDS 2,280,027 2,280,109
20 CDS 2,280,253 2,280,362
21 CDS 2,281,151 2,281,247
22 CDS 2,282,330 2,282,497
23 CDS 2,283,559 2,283,590
Other genome
Genome Chromosome Start End Links
hg38 chr17 2,337,622 2,380,675 Link
CDS sequence
ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGGTGAAGCAAATCATGGAGGAGGCTGTCACCAGGAAGTTTGTGCATGAAGACAGCAGCCACATCATTGCTTTATGTGGTGCAGTGGAGGCTTGCCTCTTGCATCAGCTGAGACGCCGTGCCGCTGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTACAGGAGCTGCAGCAACAAGCAGAGGGCAGGAAACCCTCAGGGGTCAGCCAGGAGGCCCTGCGGAGACAGGGCTCAGCCAGCGGGAAGGCCCCGGCCCTCAGCCCTCAGGCCTTGAAACACGTATGGGTACGCACGGCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGCAAGTACTACGAGAAGGAGGCACTGCTGGCAGACCCTGTGTTCGGCCCGATCCTGGCCTCTCTTCTAGTGGGACCCTGTGCCTTGGAATACACTAAGCTCAAGACAGCCGATCACTACTGGACTGACCCCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGGGTCCACCTACTCGCCAGGACTCCCCTGCAAAGCGCCCAGCCCTGGGGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCGGAGGACAGGCTGGCTGCCTGTGCCCGCGAGTGTGTGGAGTCCCTGCACCAGAACTCACGGACGCGGCTGCTCTATGGCAAGAACCACGTGCTGGTGCAGCCGAAGGAGGATATGGAGGCGGTCCCTGGCTACCTCTCCCTGCACCAGTCTGCAGAGAGCCTGACTCTGAAGTGGACCCCCAACCAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGAGCCAGGATGGCATCCAGAGGCCGCCGCTGCATTTCCCACAGGGAGGACACCTGCTGTCCTTTCTGTCCTGTCTGGAGAATGGGCTGCTGCCTCGGGGACAGCTAGAGCCCCCGCTGTGGACCCAGCAAGGGAAGGGGAAAGTGTTCCCCAAGCTACGGAAACGAAGCAGCATTCGCTCCGTGGATATGGAGGAGATGGGCACGGGGCGGGCCACCGACTATGTGTTCCGGATCATCTACCCCGGCCACAGGCACGAGCACAACGCTGGTGACATGATCGAGATGCAGGGCTTTGGGCCCAGCCTGCCAGCCTGGCACCTGGAGCCCCTGTGCAGTCAGGGCTCCTCCTGCCTCTCCTGCTCCTCCAGCAGCTCCCCACATGCAACCCCCAGCCACTGTAGCTGCATCCCCGACCGGTTGCCGCTCAGGCTACTGTGTGAGAGTATGAAGAGGCAGATCGTGTCCCGGGCCTTCTACGGCTGGCTGGCACACTGCCGCCACCTGTCCACGGTGCGGACCCACCTGTCGGCGCTGGTGCACCATAGCGTTATCCCACCTGACCGGCCCCCGGGGGCCTCCGCGGGCCTCACCAAGGACGTGTGGAGCAAGTATCAGAAGGACAAAAAGAACTACAAAGAGCTGGAGCTGCTGCGGCAAGTTTACTACGGAGGCATAGAGCACGAGATCCGCAAGGACGTCTGGCCCTTTCTGCTTGGCCACTACAAGTTCGGCATGAGCAAGAAGGAGATGGAGCAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCAGCGGGAGCGGGAGGCCCACCCAGCCACACGCACCAAGTTCTCCTCAGGCAGCAGCATCGACAGCCACGTGCAGCGCCTCATCCACCGAGACTCCACCATCAGCAACGATGTGTTTATCTCAGTGGATGATCTGGAACCCCCGGAGCCCCAGGACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGAAGAGGAGGACGGCGGTGGGGAGGAAGGCTCCAGTGGGCCCGGCCCTGCAGCTCACACTTTGAGGGAGCCCCAGGATCCCAGCCAGGAGAAGCCTCAGGCCGGAGAACTGGAGGCCGGAGAGGAGCTTGCGGCTGTGTGTGCGGCTGCCTACACTATAGAATTACTGGACACTGTGGCCTTAAACCTGCACCGCATAGACAAGGATGTGCAGAGGTGTGACCGCAACTACTGGTACTTCACGCCCCCCAACCTCGAGAGGCTCAGAGACGTCATGTGCAGCTACGTGTGGGAGCACCTGGACGTGGGCTATGTGCAGGGCATGTGCGATCTGCTGGCGCCTCTCCTGGTCACCCTCGACAATGATCAGCTGGCCTACAGCTGCTTCAGCCACCTCATGAAGAGGATGAGCCAGAACTTCCCCAACGGGGGTGCCATGGACACCCACTTTGCCAACATGCGCTCCCTCATCCAGATCCTGGACTCAGAGCTGTTTGAGCTGATGCATCAGAATGGAGACTACACCCACTTCTACTTCTGTTATCGCTGGTTCCTGCTGGATTTTAAGAGAGAACTGCTGTATGAGGATGTGTTTGCTGTGTGGGAGGTGATCTGGGCAGCCAGGCACATCTCATCGGAGCACTTTGTCCTGTTCATCGCCCTCGCCCTGGTGGAGGCCTACCGAGAGATCATCCGTGACAACAACATGGACTTCACTGACATCATCAAGTTTTTCAATGGTACTTCCCTGAAAACCACGTGTAAGAAGTGA
Amino sequence
MGSAEDAVKEKLLWNVKKEVKQIMEEAVTRKFVHEDSSHIIALCGAVEACLLHQLRRRAAGFLRSDKMAALFTKVGKTCPVAGEICHKVQELQQQAEGRKPSGVSQEALRRQGSASGKAPALSPQALKHVWVRTALIEKVLDKVVQYLAENCSKYYEKEALLADPVFGPILASLLVGPCALEYTKLKTADHYWTDPSADELVQRHRIRGPPTRQDSPAKRPALGIRKRHSSGSASEDRLAACARECVESLHQNSRTRLLYGKNHVLVQPKEDMEAVPGYLSLHQSAESLTLKWTPNQLMNGTLGDSELEKSVYWDYALVVPFSQVVCIHCHQQKSGGTLVLVSQDGIQRPPLHFPQGGHLLSFLSCLENGLLPRGQLEPPLWTQQGKGKVFPKLRKRSSIRSVDMEEMGTGRATDYVFRIIYPGHRHEHNAGDMIEMQGFGPSLPAWHLEPLCSQGSSCLSCSSSSSPHATPSHCSCIPDRLPLRLLCESMKRQIVSRAFYGWLAHCRHLSTVRTHLSALVHHSVIPPDRPPGASAGLTKDVWSKYQKDKKNYKELELLRQVYYGGIEHEIRKDVWPFLLGHYKFGMSKKEMEQVDAVVAARYQQVLAEWKACEVVVRQREREAHPATRTKFSSGSSIDSHVQRLIHRDSTISNDVFISVDDLEPPEPQDPEDSRPKPEQEAGPGTPGTAVVEQQHSVEFDSPDSGLPSSRNYSVASGIQSSLDEGQSVGFEEEDGGGEEGSSGPGPAAHTLREPQDPSQEKPQAGELEAGEELAAVCAAAYTIELLDTVALNLHRIDKDVQRCDRNYWYFTPPNLERLRDVMCSYVWEHLDVGYVQGMCDLLAPLLVTLDNDQLAYSCFSHLMKRMSQNFPNGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWAARHISSEHFVLFIALALVEAYREIIRDNNMDFTDIIKFFNGTSLKTTCKK*