ENST00000389005.6 NCBP3
Information
- Transcript ID
- ENST00000389005.6
- Genome
- hg19
- Position
- chr17:3,705,452-3,749,540
- Strand
- -
- CDS length
- 1,863
- Amino acid length
- 621
- Gene symbol
- NCBP3
- Gene type
- protein-coding
- Gene description
- nuclear cap binding subunit 3
- Gene Entrez Gene ID
- 55421
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 13 | 3,705,452 | 3,716,573 |
| 12 | 3,717,616 | 3,717,777 |
| 11 | 3,719,410 | 3,719,564 |
| 10 | 3,721,557 | 3,721,866 |
| 9 | 3,724,543 | 3,724,646 |
| 8 | 3,725,247 | 3,725,346 |
| 7 | 3,728,236 | 3,728,344 |
| 6 | 3,729,061 | 3,729,137 |
| 5 | 3,729,381 | 3,729,509 |
| 4 | 3,732,537 | 3,732,662 |
| 3 | 3,743,394 | 3,743,499 |
| 2 | 3,746,380 | 3,746,445 |
| 1 | 3,749,335 | 3,749,540 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 13 | CDS | 3,716,338 | 3,716,573 |
| 12 | CDS | 3,717,616 | 3,717,777 |
| 11 | CDS | 3,719,410 | 3,719,564 |
| 10 | CDS | 3,721,557 | 3,721,866 |
| 9 | CDS | 3,724,543 | 3,724,646 |
| 8 | CDS | 3,725,247 | 3,725,346 |
| 7 | CDS | 3,728,236 | 3,728,344 |
| 6 | CDS | 3,729,061 | 3,729,137 |
| 5 | CDS | 3,729,381 | 3,729,509 |
| 4 | CDS | 3,732,537 | 3,732,662 |
| 3 | CDS | 3,743,394 | 3,743,499 |
| 2 | CDS | 3,746,380 | 3,746,445 |
| 1 | CDS | 3,749,335 | 3,749,517 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 3,802,158 | 3,846,246 | Link |
CDS sequence
ATGGCGGCCGTACGGGGCCTGCGGGTGTCGGTGAAGGCGGAGGCCCCGGCGGGGCCGGCCCTGGGGCTCCCGTCCCCTGAGGCGGAGTCCGGTGTTGACCGTGGCGAGCCGGAGCCCATGGAGGTGGAGGAGGGCGAGCTGGAAATCGTGCCTGTGCGGCGCTCGCTCAAGGAACTGATCCCGGACACGAGCAGAAGATATGAAAACAAGGCTGGCAGCTTCATCACTGGAATTGATGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAATCTTGCCCAAAGAAATGTAGCCTTGGACCGAGACATGATGAAGAAAGCAATCCCCAAGGTGAGACTGGAGACAATCTATATTTGCGGAGTAGATGAGATGAGCACCCAAGATGTCTTTTCCTATTTTAAAGAATATCCTCCAGCTCACATCGAATGGTTGGATGATACCTCCTGTAATGTAGTTTGGCTGGATGAAATGACAGCCACACGAGCACTTATCAATATGAGCTCCCTGCCTGCACAGGATAAGATCAGAAGCAGGGATGCCAGTGAGGACAAGTCAGCTGAGAAAAGGAAAAAAGACAAGCAGGAAGACAGTTCAGATGATGATGAAGCTGAAGAAGGAGAGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTGGATACGTTGTCTCAGGTAGAAGAGGAGTCTTTGTTAAGAAACGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGGTTATTCATGAGATTTGCTACAAAAGATGACAAAAAGGAACTTGGAGCAGCCAGAAGAAGTCAGTATTACATGAAATATGGGAATCCAAATTATGGAGGCATGAAAGGAATTCTTAGCAATTCATGGAAGCGAAGATATCATTCCCGTCGTATTCAGCGGGACGTGATCAAGAAGAGAGCCCTGATTGGGGATGACGTTGGCTTGACGTCGTATAAACATCGACATTCTGGGCTAGTGAATGTTCCCGAGGAACCCATTGAAGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAAGAAGACCAGGACATGGATGCAGATGACAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCCAGTGCCAGCAGCTCAGACTCAGATGAAATGGACTATGATCTAGAACTGAAAATGATTTCCACGCCTTCACCAAAGAAAAGCATGAAAATGACTATGTATGCTGACGAAGTGGAATCTCAGTTGAAAAATATTAGGAACTCCATGAGGGCAGATAGTGTATCTTCAAGCAATATCAAAAACCGAATTGGTAACAAATTACCACCTGAGAAATTTGCAGATGTCCGACATCTATTAGATGAGAAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGCAGTACTAAATCAGATATACGCCAGCGGTTAGGAAAAAGACCACATTCTCCGGAAAAGGCTTTTAGTAGTAACCCCGTCGTTCGGAGAGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAAGACCAAAGAAAAGAATACGAAGAAAGTGGATCACAGGGCGCCTGGCGCTGAGGAAGACGACTCTGAGCTGCAAAGGGCATGGGGGGCTCTGATTAAGGAGAAAGAGCAGTCTCGCCAAAAGAAGAGCCGGTTAGATAACTTACCATCTCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTGA
Amino sequence
MAAVRGLRVSVKAEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRRSLKELIPDTSRRYENKAGSFITGIDVTSKEAIEKKEQRAKRFHFRSEVNLAQRNVALDRDMMKKAIPKVRLETIYICGVDEMSTQDVFSYFKEYPPAHIEWLDDTSCNVVWLDEMTATRALINMSSLPAQDKIRSRDASEDKSAEKRKKDKQEDSSDDDEAEEGEVEDENSSDVELDTLSQVEEESLLRNDLRPANKLAKGNRLFMRFATKDDKKELGAARRSQYYMKYGNPNYGGMKGILSNSWKRRYHSRRIQRDVIKKRALIGDDVGLTSYKHRHSGLVNVPEEPIEEEEEEEEEEEEEEEEDQDMDADDRVVVEYHEELPALKQPRERSASRRSSASSSDSDEMDYDLELKMISTPSPKKSMKMTMYADEVESQLKNIRNSMRADSVSSSNIKNRIGNKLPPEKFADVRHLLDEKRQHSRPRPPVSSTKSDIRQRLGKRPHSPEKAFSSNPVVRREPSSDVHSRLGVPRQDSKGLYADTREKKSGNLWTRLGSAPKTKEKNTKKVDHRAPGAEEDDSELQRAWGALIKEKEQSRQKKSRLDNLPSLQIEVSRESSSGSEAES*