ENST00000575301.5 NLGN2
Information
- Transcript ID
- ENST00000575301.5
- Genome
- hg19
- Position
- chr17:7,308,193-7,322,003
- Strand
- +
- CDS length
- 2,508
- Amino acid length
- 836
- Gene symbol
- NLGN2
- Gene type
- protein-coding
- Gene description
- neuroligin 2
- Gene Entrez Gene ID
- 57555
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 7,308,193 | 7,308,929 |
| 2 | 7,311,331 | 7,312,031 |
| 3 | 7,315,476 | 7,315,526 |
| 4 | 7,317,663 | 7,317,812 |
| 5 | 7,317,982 | 7,318,167 |
| 6 | 7,318,275 | 7,318,467 |
| 7 | 7,318,830 | 7,319,426 |
| 8 | 7,320,245 | 7,322,003 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 7,311,575 | 7,312,031 |
| 3 | CDS | 7,315,476 | 7,315,526 |
| 4 | CDS | 7,317,663 | 7,317,812 |
| 5 | CDS | 7,317,982 | 7,318,167 |
| 6 | CDS | 7,318,275 | 7,318,467 |
| 7 | CDS | 7,318,830 | 7,319,426 |
| 8 | CDS | 7,320,245 | 7,321,118 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 7,404,874 | 7,418,684 | Link |
CDS sequence
ATGTGGCTCCTGGCGCTGTGTCTGGTGGGGCTGGCGGGGGCTCAACGCGGGGGAGGGGGTCCCGGCGGCGGCGCCCCGGGCGGCCCCGGCCTGGGCCTCGGCAGCCTCGGCGAGGAGCGCTTCCCGGTGGTGAACACGGCCTACGGGCGAGTGCGCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCCCGTCGTGCAGTTCTTGGGCGTGCCCTACGCCACGCCGCCCCTGGGCGCCCGCCGCTTCCAGCCGCCTGAGGCGCCCGCCTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCCGCCCGCCTGCCCGCAGAACCTGCACGGGGCGCTGCCCGCCATCATGCTGCCTGTGTGGTTCACCGACAACTTGGAGGCGGCCGCCACCTACGTGCAGAACCAGAGCGAGGACTGCCTGTACCTCAACCTCTACGTGCCCACCGAGGACGGTCCGCTCACAAAAAAACGTGACGAGGCGACGCTCAATCCGCCAGACACAGATATCCGTGACCCTGGGAAGAAGCCTGTGATGCTGTTTCTCCATGGCGGCTCCTACATGGAGGGGACCGGAAACATGTTCGATGGCTCAGTCCTGGCTGCCTATGGCAACGTCATTGTAGCCACGCTCAACTACCGTCTTGGGGTGCTCGGTTTTCTCAGCACCGGGGACCAGGCTGCAAAAGGCAACTATGGGCTCCTGGACCAGATCCAGGCCCTGCGCTGGCTCAGTGAAAACATCGCCCACTTTGGGGGCGACCCCGAGCGTATCACCATCTTTGGTTCCGGGGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCTCCCACCATTCAGAAGGGCTGTTCCAGAAGGCCATCGCCCAGAGTGGCACCGCCATTTCCAGCTGGTCTGTCAACTACCAGCCGCTCAAGTACACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACCGAGAGGACAGCGCTGAAGCTGTGGAGTGTCTGCGCCGGAAGCCCTCCCGGGAGCTGGTGGACCAGGACGTGCAGCCTGCCCGCTACCACATCGCCTTTGGGCCCGTGGTGGATGGCGACGTGGTCCCCGATGACCCTGAGATCCTCATGCAGCAGGGAGAATTCCTCAACTACGACATGCTCATCGGCGTCAACCAGGGAGAGGGCCTCAAGTTCGTGGAGGACTCTGCAGAGAGCGAGGACGGTGTGTCTGCCAGCGCCTTTGACTTCACTGTCTCCAACTTTGTGGACAACCTGTATGGCTACCCGGAAGGCAAGGATGTGCTTCGGGAGACCATCAAGTTTATGTACACAGACTGGGCCGACCGGGACAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGCTCTTTACTGACCACCAATGGGTGGCACCAGCTGTGGCCACTGCCAAGCTGCACGCCGACTACCAGTCTCCCGTCTACTTTTACACCTTCTACCACCACTGCCAGGCGGAGGGCCGGCCTGAGTGGGCAGATGCGGCGCACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATGGTGGGTGCCACCGACCTCTTCCCCTGTAACTTCTCCAAGAATGACGTCATGCTCAGTGCCGTGGTCATGACCTACTGGACCAACTTCGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGCAGGATACCAAGTTCATCCACACCAAGCCCAATCGCTTCGAGGAGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGGCCTGAAGCCACGCGTGCGTGACAACTACCGCGCCAACAAGGTGGCCTTCTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCACACGGAGCTCTTCACCACCACCACGCGCCTGCCTCCCTACGCCACGCGCTGGCCGCCTCGTCCCCCCGCTGGCGCCCCGGGCACACGCCGGCCCCCGCCGCCTGCCACCCTGCCTCCCGAGCCCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGCTTCCCCGGGGACTCACGGGACTACTCCACGGAGCTGAGCGTCACCGTGGCCGTGGGTGCCTCCCTCCTCTTCCTCAACATCCTGGCCTTTGCTGCCCTCTACTACAAGCGGGACCGGCGGCAGGAGCTGCGGTGCAGGCGGCTTAGCCCACCTGGCGGCTCAGGCTCTGGCGTGCCTGGTGGGGGCCCCCTGCTCCCCGCCGCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTGGTGTCACTGCAGCTGAAGCGGGGTGGTGGCGTCGGGGCGGACCCTGCCGAGGCTCTGCGCCCTGCCTGCCCGCCCGACTACACCCTGGCCCTGCGCCGGGCACCGGACGATGTGCCTCTCTTGGCCCCCGGGGCCCTGACCCTGCTGCCCAGTGGCCTGGGGCCACCGCCACCCCCACCGCCCCCCTCCCTTCATCCCTTCGGGCCCTTCCCCCCGCCCCCTCCCACCGCCACCAGCCACAACAACACGCTACCCCACCCCCACTCCACCACTCGGGTATAG
Amino sequence
MWLLALCLVGLAGAQRGGGGPGGGAPGGPGLGLGSLGEERFPVVNTAYGRVRGVRRELNNEILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQNLHGALPAIMLPVWFTDNLEAAATYVQNQSEDCLYLNLYVPTEDGPLTKKRDEATLNPPDTDIRDPGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVATLNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLSENIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLKYTRLLAAKVGCDREDSAEAVECLRRKPSRELVDQDVQPARYHIAFGPVVDGDVVPDDPEILMQQGEFLNYDMLIGVNQGEGLKFVEDSAESEDGVSASAFDFTVSNFVDNLYGYPEGKDVLRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHADYQSPVYFYTFYHHCQAEGRPEWADAAHGDELPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWSKFNSKEKQYLHIGLKPRVRDNYRANKVAFWLELVPHLHNLHTELFTTTTRLPPYATRWPPRPPAGAPGTRRPPPPATLPPEPEPEPGPRAYDRFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDRRQELRCRRLSPPGGSGSGVPGGGPLLPAAGRELPPEEELVSLQLKRGGGVGADPAEALRPACPPDYTLALRRAPDDVPLLAPGALTLLPSGLGPPPPPPPPSLHPFGPFPPPPPTATSHNNTLPHPHSTTRV*