ENST00000580299.2 CTC1
Information
- Transcript ID
- ENST00000580299.2
- Genome
- hg19
- Position
- chr17:8,131,144-8,151,376
- Strand
- -
- CDS length
- 3,390
- Amino acid length
- 1,130
- Gene symbol
- CTC1
- Gene type
- protein-coding
- Gene description
- CST telomere replication complex component 1
- Gene Entrez Gene ID
- 80169
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 21 | 8,131,144 | 8,131,637 |
| 20 | 8,131,821 | 8,131,947 |
| 19 | 8,132,653 | 8,132,764 |
| 18 | 8,133,209 | 8,133,286 |
| 17 | 8,133,612 | 8,133,786 |
| 16 | 8,133,881 | 8,133,969 |
| 15 | 8,134,594 | 8,134,787 |
| 14 | 8,135,044 | 8,135,133 |
| 13 | 8,135,221 | 8,135,545 |
| 12 | 8,135,679 | 8,135,793 |
| 11 | 8,136,224 | 8,136,350 |
| 10 | 8,137,773 | 8,137,973 |
| 9 | 8,138,067 | 8,138,244 |
| 8 | 8,138,371 | 8,138,603 |
| 7 | 8,139,149 | 8,139,277 |
| 6 | 8,139,376 | 8,139,660 |
| 5 | 8,140,693 | 8,140,837 |
| 4 | 8,141,349 | 8,141,560 |
| 3 | 8,141,710 | 8,141,947 |
| 2 | 8,146,303 | 8,146,466 |
| 1 | 8,151,322 | 8,151,376 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 21 | CDS | 8,131,498 | 8,131,637 |
| 20 | CDS | 8,131,821 | 8,131,947 |
| 19 | CDS | 8,132,653 | 8,132,764 |
| 18 | CDS | 8,133,209 | 8,133,286 |
| 17 | CDS | 8,133,612 | 8,133,786 |
| 16 | CDS | 8,133,881 | 8,133,969 |
| 15 | CDS | 8,134,594 | 8,134,787 |
| 14 | CDS | 8,135,044 | 8,135,133 |
| 13 | CDS | 8,135,221 | 8,135,545 |
| 12 | CDS | 8,135,679 | 8,135,793 |
| 11 | CDS | 8,136,224 | 8,136,350 |
| 10 | CDS | 8,137,773 | 8,137,973 |
| 9 | CDS | 8,138,067 | 8,138,244 |
| 8 | CDS | 8,138,371 | 8,138,603 |
| 7 | CDS | 8,139,149 | 8,139,277 |
| 6 | CDS | 8,139,376 | 8,139,660 |
| 5 | CDS | 8,140,693 | 8,140,837 |
| 4 | CDS | 8,141,349 | 8,141,560 |
| 3 | CDS | 8,141,710 | 8,141,947 |
| 2 | CDS | 8,146,303 | 8,146,466 |
| 1 | CDS | 8,151,322 | 8,151,354 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 8,227,826 | 8,248,058 | Link |
CDS sequence
ATGGCGGCTGGCCGGGCCCAGGTCCCTTCCTCCGAACAAGCCTGGCTTGAGGATGCTCAGGTCTTCATCCAAAAGACCCTGTGTCCAGCTGTCAAGGAGCCTAATGTCCAGTTGACTCCATTGGTAATTGATTGTGTGAAGACTGTCTGGTTGTCCCAGGGAAGGAACCAAGGTTCTACACTGCCCCTCAGCTATAGCTTCGTCTCAGTACAGGACCTCAAGACTCACCAGCGTCTCCCATGCTGCAGCCACCTGTCGTGGAGCAGTAGTGCATACCAGGCCTGGGCCCAAGAGGCTGGACCAAATGGGAACCCCCTGCCCCGAGAGCAGCTGTTACTTTTAGGGACACTAACAGACCTATCGGCAGACTTGGAACAAGAGTGCAGGAACGGAAGCCTCTATGTGAGAGATAACACTGGCGTCCTGAGCTGTGAGCTCATAGACCTGGACCTTTCTTGGTTGGGCCATCTTTTTCTGTTCCCCCGTTGGAGTTACCTCCCTCCTGCCAGGTGGAATTCCTCAGGGGAAGGGCACTTGGAGCTGTGGGATGCCCCTGTGCCAGTGTTTCCTTTGACCATCAGTCCTGGCCCCGTCACGCCTATCCCTGTCCTCTACCCAGAGAGTGCTTCCTGCCTGCTCAGGCTCAGAAACAAGCTCAGAGGTGTGCAGCGAAACCTGGCTGGGAGTCTAGTTCGATTGAGTGCTCTGGTGAAAAGTAAACAGAAAGCTTACTTCATCCTGTCTCTTGGTAGATCACACCCAGCTGTCACCCACGTGTCCATCATCGTGCAGGTCCCTGCCCAGCTGGTGTGGCACAGAGCCCTTCGGCCTGGTACAGCCTATGTGCTGACAGAACTGCGAGTGTCCAAGATCCGTGGTCAGCGCCAGCATGTTTGGATGACCAGTCAGTCCTCCCGTCTGTTGCTGCTGAAACCAGAATGTGTGCAGGAGCTGGAACTGGAGCTGGAAGGACCCCTCTTAGAGGCTGACCCCAAGCCACTCCCCATGCCCAGCAACTCGGAGGACAAGAAGGATCCAGAAAGTCTTGTCCGGTATTCTAGACTCCTATCCTATTCGGGAGCAGTCACTGGCGTGTTGAATGAGCCCGCTGGCCTCTATGAGCTGGATGGGCAGCTGGGGCTCTGCCTTGCCTACCAGCAGTTCCGTGGCCTTAGGCGGGTGATGCGACCTGGAGTGTGTCTGCAGCTCCAGGATGTTCACCTGCTCCAGTCAGTGGGAGGGGGGACAAGAAGGCCAGTGCTCGCCCCCTGCCTCCGTGGCGCCGTTCTGCTTCAAAGCTTCTCTCGTCAGAAGCCTGGGGCTCACTCATCCCGTCAAGCCTACGGGGCCTCCCTGTACGAGCAGCTGGTGTGGGAACGTCAGTTAGGACTTCCCCTCTACCTGTGGGCTACCAAGGCCCTGGAGGAGCTGGCCTGCAAGCTGTGTCCCCATGTGCTGAGACACCACCAGTTCCTGCAACATTCCTCTCCTGGGAGCCCCAGCCTGGGACTGCAACTCCTGGCTCCTACCCTGGATCTTCTAGCTCCGCCAGGCAGCCCTGTTCGGAATGCACACAATGAGATCCTTGAAGAGCCACATCACTGTCCCCTCCAGAAATACACTCGGCTGCAGACTCCCTCCTCCTTCCCCACTCTGGCCACCCTGAAAGAAGAAGGACAGCGTAAGGCCTGGGCCTCCTTTGACCCTAAGGCCCTTCTGCCCCTCCCGGAGGCCTCCTACCTGCCCAGCTGCCAACTCAATCGCCGCCTGGCTTGGTCCTGGCTCTGTCTGCTGCCCTCTGCCTTCTGCCCAGCCCAGGTTTTACTTGGGGTTCTGGTGGCTTCATCTCATAAAGGTTGTCTGCAACTTCGGGACCAAAGTGGTTCCCTGCCCTGCCTGCTCCTGGCCAAGCACTCTCAACCCCTCAGTGACCCACGGCTGATAGGCTGCCTGGTGCGGGCAGAGAGGTTTCAGTTGATCGTAGAGAGGGACGTGAGAAGCAGCTTCCCTTCCTGGAAGGAGCTGAGCATGCCAGGCTTCATCCAGAAGCAGCAGGCCAGAGTCTATGTCCAGTTCTTTCTGGCTGATGCCCTGATCCTGCCTGTGCCCAGACCCTGCCTTCATTCAGCAACACCCTCAACACCTCAGACAGATCCCACCGGCCCAGAGGGACCCCACCTAGGACAGAGCCGGCTCTTCTTGCTCTGCCACAAGGAGGCCCTCATGAAGCGTAATTTTTGTGTCCCCCCAGGAGCAAGTCCAGAGGTGCCCAAGCCCGCCCTCAGTTTCTATGTGTTGGGGAGCTGGCTTGGGGGCACCCAGAGGAAGGAGGGTACTGGATGGGGGCTGCCCGAGCCCCAGGGAAATGACGACAATGATCAGAAGGTTCACCTCATTTTCTTTGGCTCTTCAGTCCGCTGGTTTGAGTTCTTGCACCCGGGACAGGTGTACCGACTCATAGCTCCTGGCCCCGCTACACCAATGTTGTTTGAAAAGGATGGTTCATCCTGCATATCTCGGCGTCCTCTGGAGTTGGCTGGCTGTGCATCCTGCCTCACTGTCCAGGACAACTGGACTCTGGAGCTTGAAAGCTCCCAGGATATCCAAGATGTGCTGGATGCAAACAAGTCATTGCCTGAATCCTCACTGACCGACCTGCTCAGTGACAATTTCACAGATTCCTTGGTGTCTTTCTCCGCTGAGATTTTGTCACGGACACTATGTGAACCCCTTGTGGCGTCTCTCTGGATGAAACTGGGGAACACGGGGGCCATGAGAAGGTGTGTGAAGCTAACAGTCGCTCTTGAGACTGCTGAATGTGAATTCCCCCCTCACCTGGATGTATATATAGAAGACCCACACTTGCCTCCCTCACTAGGACTACTTCCAGGAGCCCGGGTCCACTTCAGCCAGTTGGAGAAAAGGGTTTCCAGATCTCACAATGTTTATTGTTGTTTCCGGTCATCCACTTATGTGCAGGTCCTGAGTTTTCCCCCTGAGACCACCATCAGCATTCCCCTGCCCCACATCTACCTGGCTGAACTTCTGCAGGGTGGTCAGTCCCCATTCCAGGCCACTGCCTCTTGCCATATCGTCTCTGTCTTCAGCCTTCAGCTCTTCTGGTCTTCAGCCAGGGTTGACGAGCCCATGACCATGTTCCTCTGGACACTTTGTACTAGCCCCTCTGTCCTCCGTCCTATTGTGCTTTCTTTTGAGCTGGAAAGGAAACCGTCGAAGATCGTCCCATTAGAACCTCCTCGGCTACAGCGATTCCAGTGTGGAGAGCTCCCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCTATCCGAGAGTCAGAGTACTCCAGCTCTCTGGGGATCCTTGCTTCCTCCTGTTAA
Amino sequence
MAAGRAQVPSSEQAWLEDAQVFIQKTLCPAVKEPNVQLTPLVIDCVKTVWLSQGRNQGSTLPLSYSFVSVQDLKTHQRLPCCSHLSWSSSAYQAWAQEAGPNGNPLPREQLLLLGTLTDLSADLEQECRNGSLYVRDNTGVLSCELIDLDLSWLGHLFLFPRWSYLPPARWNSSGEGHLELWDAPVPVFPLTISPGPVTPIPVLYPESASCLLRLRNKLRGVQRNLAGSLVRLSALVKSKQKAYFILSLGRSHPAVTHVSIIVQVPAQLVWHRALRPGTAYVLTELRVSKIRGQRQHVWMTSQSSRLLLLKPECVQELELELEGPLLEADPKPLPMPSNSEDKKDPESLVRYSRLLSYSGAVTGVLNEPAGLYELDGQLGLCLAYQQFRGLRRVMRPGVCLQLQDVHLLQSVGGGTRRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWERQLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPSAFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFPSWKELSMPGFIQKQQARVYVQFFLADALILPVPRPCLHSATPSTPQTDPTGPEGPHLGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALSFYVLGSWLGGTQRKEGTGWGLPEPQGNDDNDQKVHLIFFGSSVRWFEFLHPGQVYRLIAPGPATPMLFEKDGSSCISRRPLELAGCASCLTVQDNWTLELESSQDIQDVLDANKSLPESSLTDLLSDNFTDSLVSFSAEILSRTLCEPLVASLWMKLGNTGAMRRCVKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFRSSTYVQVLSFPPETTISIPLPHIYLAELLQGGQSPFQATASCHIVSVFSLQLFWSSARVDEPMTMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRESEYSSSLGILASSC*