ENST00000577936.2 FOXN1

Information
Transcript ID
ENST00000577936.2
Genome
hg19
Position
chr17:26,833,261-26,865,914
Strand
+
CDS length
1,947
Amino acid length
649
Gene symbol
FOXN1
Gene type
protein-coding
Gene description
forkhead box N1
Gene Entrez Gene ID
8456
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 26,833,261 26,833,461
2 26,850,979 26,851,110
3 26,851,521 26,851,985
4 26,854,269 26,854,379
5 26,856,112 26,856,242
6 26,857,767 26,857,863
7 26,861,349 26,861,556
8 26,861,725 26,862,216
9 26,864,135 26,865,914
CDS
Exon number Type Start Stop
2 CDS 26,850,988 26,851,110
3 CDS 26,851,521 26,851,985
4 CDS 26,854,269 26,854,379
5 CDS 26,856,112 26,856,242
6 CDS 26,857,767 26,857,863
7 CDS 26,861,349 26,861,556
8 CDS 26,861,725 26,862,216
9 CDS 26,864,135 26,864,454
Other genome
Genome Chromosome Start End Links
hg38 chr17 28,506,243 28,538,896 Link
CDS sequence
ATGGTGTCGCTACCCCCGCCGCAGTCTGACGTCACGCTGCCGGGCCCCACCAGACTGGAGGGCGAGCGCCAAGGGGACCTCATGCAGGCACCGGGCCTCCCAGGCTCCCCTGCCCCACAGAGTAAGCATGCCGGCTTCAGCTGCTCGTCATTTGTGTCCGACGGCCCTCCAGAGAGGACACCCTCACTGCCCCCACACAGCCCCCGCATTGCGTCACCAGGGCCCGAGCAAGTCCAGGGCCACTGCCCAGCCGGCCCCGGCCCTGGGCCCTTCAGGCTCTCACCCTCAGACAAGTATCCTGGCTTTGGCTTTGAGGAGGCCGCAGCAAGCAGCCCTGGGCGATTCCTCAAGGGCAGCCACGCGCCCTTCCACCCGTACAAGCGGCCTTTCCATGAGGACGTCTTCCCAGAGGCCGAGACCACCCTGGCCCTCAAAGGACACTCCTTTAAGACCCCAGGGCCGCTGGAGGCCTTCGAGGAGATCCCAGTGGACGTGGCGGAGGCCGAGGCCTTCCTGCCTGGCTTCTCAGCAGAGGCCTGGTGTAACGGGCTCCCCTACCCCAGCCAGGAGCATGGCCCCCAAGTCCTGGGTTCAGAGGTCAAAGTCAAGCCCCCAGTTCTGGAGAGTGGTGCTGGGATGTTCTGCTACCAGCCTCCCTTGCAGCATATGTACTGCTCCTCCCAGCCCCCCTTCCACCAGTACTCGCCAGGTGGTGGCAGCTACCCCATACCCTACCTGGGCTCCTCACACTATCAGTACCAGCGAATGGCACCCCAGGCCAGCACCGATGGGCACCAGCCTCTCTTCCCAAAACCCATCTATTCCTACAGCATCCTCATCTTCATGGCCCTTAAGAACAGTAAAACTGGGAGCCTTCCCGTCAGCGAGATCTACAATTTTATGACGGAGCACTTTCCTTACTTCAAGACAGCACCCGATGGCTGGAAGAATTCTGTCCGGCACAACCTATCCCTCAACAAGTGCTTCGAGAAGGTGGAGAACAAATCAGGAAGTTCCTCCCGCAAGGGCTGCCTGTGGGCCCTCAATCCGGCCAAGATCGACAAGATGCAAGAGGAGCTGCAAAAATGGAAGAGGAAAGATCCCATTGCTGTGCGCAAAAGCATGGCCAAGCCAGAAGAGCTGGACAGCCTCATTGGAGACAAGAGAGAAAAGCTGGGCTCCCCACTCCTGGGCTGTCCGCCCCCTGGGCTGTCCGGCTCAGGCCCCATCCGGCCCCTGGCACCCCCAGCTGGCCTCTCCCCACCACTGCACTCACTCCACCCAGCTCCAGGCCCCATTCCTGGCAAGAACCCCCTGCAGGACCTACTTATGGGGCACACACCCTCCTGCTATGGGCAGACATACTTGCACCTCTCACCAGGCCTGGCCCCTCCTGGACCCCCGCAGCCATTGTTCCCACAGCCGGACGGGCACCTTGAGCTGCGGGCCCAGCCAGGCACCCCCCAGGACTCGCCTCTGCCTGCCCACACCCCACCCAGCCACAGTGCCAAGCTACTGGCCGAGCCTTCCCCAGCCAGGACTATGCACGACACCCTGCTGCCAGATGGAGACCTTGGCACTGACCTGGATGCCATCAATCCCTCACTCACTGACTTCGACTTCCAGGGAAACCTGTGGGAACAGTTGAAGGATGATAGCTTGGCCCTCGACCCCCTGGTACTGGTGACCTCATCCCCGACATCATCTTCGATGCCACCACCCCAGCCACCACCTCACTGCTTCCCCCCTGGGCCCTGTCTGACAGAGACAGGCAGTGGGGCAGGTGACTTGGCAGCCCCGGGCAGTGGTGGCTCCGGGGCACTGGGTGACCTGCACCTCACCACCCTCTACTCTGCCTTTATGGAGCTGGAGCCCACGCCCCCCACGGCCCCTGCAGGCCCCTCTGTGTACCTCAGCCCCAGCTCCAAGCCCGTGGCCCTGGCATGA
Amino sequence
MVSLPPPQSDVTLPGPTRLEGERQGDLMQAPGLPGSPAPQSKHAGFSCSSFVSDGPPERTPSLPPHSPRIASPGPEQVQGHCPAGPGPGPFRLSPSDKYPGFGFEEAAASSPGRFLKGSHAPFHPYKRPFHEDVFPEAETTLALKGHSFKTPGPLEAFEEIPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLGSEVKVKPPVLESGAGMFCYQPPLQHMYCSSQPPFHQYSPGGGSYPIPYLGSSHYQYQRMAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPAKIDKMQEELQKWKRKDPIAVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPAPGPIPGKNPLQDLLMGHTPSCYGQTYLHLSPGLAPPGPPQPLFPQPDGHLELRAQPGTPQDSPLPAHTPPSHSAKLLAEPSPARTMHDTLLPDGDLGTDLDAINPSLTDFDFQGNLWEQLKDDSLALDPLVLVTSSPTSSSMPPPQPPPHCFPPGPCLTETGSGAGDLAAPGSGGSGALGDLHLTTLYSAFMELEPTPPTAPAGPSVYLSPSSKPVALA*