ENST00000581647.5 ASPSCR1
Information
- Transcript ID
- ENST00000581647.5
- Genome
- hg19
- Position
- chr17:79,935,507-79,953,026
- Strand
- +
- CDS length
- 549
- Amino acid length
- 183
- Gene symbol
- ASPSCR1
- Gene type
- protein-coding
- Gene description
- ASPSCR1 tether for SLC2A4, UBX domain containing
- Gene Entrez Gene ID
- 79058
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 79,935,507 | 79,935,624 |
| 2 | 79,937,060 | 79,937,115 |
| 3 | 79,941,430 | 79,941,544 |
| 4 | 79,943,383 | 79,943,483 |
| 5 | 79,952,697 | 79,953,026 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 79,935,523 | 79,935,624 |
| 2 | CDS | 79,937,060 | 79,937,115 |
| 3 | CDS | 79,941,430 | 79,941,544 |
| 4 | CDS | 79,943,383 | 79,943,483 |
| 5 | CDS | 79,952,697 | 79,952,871 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 81,977,631 | 81,995,150 | Link |
CDS sequence
ATGGCGGCCCCGGCAGGCGGCGGAGGCTCCGCGGTGTCGGTGCTGGCCCCGAACGGCCGGCGCCACACGGTGAAGGTGACGCCGAGCACCGTGCTGCTTCAGGTTCTGGAGGACACGTGCCGGCGGCAGGACTTCAACCCCTGTGAATATGATCTGAAGTTTCAGAGGAGCGTGCTCGACCTTTCTCTCCAGTGGAGATTTGCCAACCTGCCCAACAATGCCAAGCTGGAGATGGTGCCCGCTTCCCGGAGCCGTGAGGGGCCTGAGAACATGGTTCGCATCGCTTTGCAGCTGGACGATGGCTCGAGGTTGCAGGACTCTTTCTGTTCAGGCCAGACCCTCTGGGAGCTTCTCAGCCATTTTCCACAGATCAGGGAGTGCCTGCAGCACCCCGGCGGGGCCACCCCAGTCTGCGTGTACACGAGGGATGAGGTAGGCGGCCTGCTCTTGCTCACCCAGTCCCCGCTCACTTTCAGCCCACTTTCCAACTGGAAAATCTGCTGTCCCGCAGCCGTCTCCAGGGCAGTGGCGGGAGACTCGGGCTCTTGA
Amino sequence
MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLDLSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVGGLLLLTQSPLTFSPLSNWKICCPAAVSRAVAGDSGS*