ENST00000616645.4 HSH2D
Information
- Transcript ID
- ENST00000616645.4
- Genome
- hg19
- Position
- chr19:16,244,838-16,269,381
- Strand
- +
- CDS length
- 1,059
- Amino acid length
- 353
- Gene symbol
- HSH2D
- Gene type
- protein-coding
- Gene description
- hematopoietic SH2 domain containing
- Gene Entrez Gene ID
- 84941
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 16,244,838 | 16,245,045 |
| 2 | 16,252,751 | 16,252,903 |
| 3 | 16,254,442 | 16,254,584 |
| 4 | 16,259,534 | 16,259,685 |
| 5 | 16,263,362 | 16,263,451 |
| 6 | 16,263,853 | 16,264,018 |
| 7 | 16,265,209 | 16,265,301 |
| 8 | 16,268,020 | 16,268,207 |
| 9 | 16,268,209 | 16,269,381 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 16,259,561 | 16,259,685 |
| 5 | CDS | 16,263,362 | 16,263,451 |
| 6 | CDS | 16,263,853 | 16,264,018 |
| 7 | CDS | 16,265,209 | 16,265,301 |
| 8 | CDS | 16,268,020 | 16,268,207 |
| 9 | CDS | 16,268,209 | 16,268,605 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr19 | 16,134,028 | 16,158,570 | Link |
CDS sequence
ATGACAGAGGCCGGGAAGCTGCCCCTACCGCTACCCCCACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCCTTTCTCATCAGGGTCAGTCACAGCCATGTGGGCTACACACTCTCCTACAAAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCGTCAGCAGAGATGAACAGAATAACCACCAAGGAAGCCACTTCCTCCTGCCCCCCAAAATCCCCTCTTGGAGAGACCCGCCAGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCACCTCGCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAGGGGATCCCACCTCGGGGGACAGAGGCTACACGGATCCCTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGCCCCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGTACTGCTAG
Amino sequence
MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRRELLTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSVSCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC*