ENST00000589146.5 CAPNS1

Information
Transcript ID
ENST00000589146.5
Genome
hg19
Position
chr19:36,630,855-36,640,814
Strand
+
CDS length
285
Amino acid length
95
Gene symbol
CAPNS1
Gene type
protein-coding
Gene description
calpain small subunit 1
Gene Entrez Gene ID
826
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 36,630,855 36,631,059
2 36,631,899 36,631,977
3 36,636,939 36,636,956
4 36,637,098 36,637,214
5 36,640,480 36,640,538
6 36,640,715 36,640,814
CDS
Exon number Type Start Stop
2 CDS 36,631,914 36,631,977
3 CDS 36,636,939 36,636,956
4 CDS 36,637,098 36,637,214
5 CDS 36,640,480 36,640,538
6 CDS 36,640,715 36,640,741
Other genome
Genome Chromosome Start End Links
hg38 chr19 36,139,953 36,149,912 Link
CDS sequence
ATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCTCTATAACATGATCATCCGACGCTACTCAGATGAAAGTGGGAACATGGATTTTGACAACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGATGGCACTGGACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCTGACTATGTATTCCTGA
Amino sequence
MFLVNSFLKGGGGGGGGGGGLGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTMYS*