ENST00000588750.5 APOC1

Information
Transcript ID
ENST00000588750.5
Genome
hg19
Position
chr19:45,417,504-45,422,599
Strand
+
CDS length
252
Amino acid length
84
Gene symbol
APOC1
Gene type
protein-coding
Gene description
apolipoprotein C1
Gene Entrez Gene ID
341
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,417,504 45,417,746
2 45,417,929 45,417,990
3 45,418,129 45,418,206
4 45,419,447 45,419,582
5 45,422,430 45,422,599
CDS
Exon number Type Start Stop
3 CDS 45,418,149 45,418,206
4 CDS 45,419,447 45,419,582
5 CDS 45,422,430 45,422,487
Other genome
Genome Chromosome Start End Links
hg38 chr19 44,914,247 44,919,342 Link
CDS sequence
ATGAGGCTCTTCCTGTCGCTCCCGGTCCTGGTGGTGGTTCTGTCGATCGTCTTGGAAGGCCCAGCCCCAGCCCAGGGGACCCCAGACGTCTCCAGTGCCTTGGATAAGCTGAAGGAGTTTGGAAACACACTGGAGGACAAGGCTCGGGAACTCATCAGCCGCATCAAACAGAGTGAACTTTCTGCCAAGATGCGGGAGTGGTTTTCAGAGACATTTCAGAAAGTGAAGGAGAAACTCAAGATTGACTCATGA
Amino sequence
MRLFLSLPVLVVVLSIVLEGPAPAQGTPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSETFQKVKEKLKIDS*