ENST00000681539.1 TBC1D20
Information
- Transcript ID
- ENST00000681539.1
- Genome
- hg19
- Position
- chr20:416,130-443,194
- Strand
- -
- CDS length
- 1,212
- Amino acid length
- 404
- Gene symbol
- TBC1D20
- Gene type
- protein-coding
- Gene description
- TBC1 domain family member 20
- Gene Entrez Gene ID
- 128637
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 416,130 | 418,242 |
| 8 | 419,194 | 419,485 |
| 7 | 419,752 | 419,939 |
| 6 | 420,892 | 421,033 |
| 5 | 422,232 | 422,333 |
| 4 | 422,501 | 422,687 |
| 3 | 425,694 | 425,774 |
| 2 | 428,533 | 428,718 |
| 1 | 442,980 | 443,194 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 419,230 | 419,485 |
| 7 | CDS | 419,752 | 419,939 |
| 6 | CDS | 420,892 | 421,033 |
| 5 | CDS | 422,232 | 422,333 |
| 4 | CDS | 422,501 | 422,687 |
| 3 | CDS | 425,694 | 425,774 |
| 2 | CDS | 428,533 | 428,718 |
| 1 | CDS | 442,980 | 443,049 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 435,486 | 462,550 | Link |
CDS sequence
ATGGCCCTCCGGAGTGCGCAGGGCGACGGCCCCACCTCCGGCCACTGGGACGGCGGCGCGGAGAAGGCAGACTTTAACGCCAAAAGGAAAAAGAAAGTGGCAGAGATACACCAGGCTCTGAACAGTGATCCCACTGATGTGGCTGCCCTTAGACGCATGGCTATCAGTGAAGGAGGGCTCCTGACTGATGAGATCAGACGAAAAGTGTGGCCCAAGCTCCTCAATGTCAATGCCAATGACCCACCTCCTATATCAGGGAAGAACCTACGGCAGATGAGCAAGGACTACCAACAAGTGTTGCTGGACGTCCGGCGGTCATTGCGGCGGTTCCCTCCTGGCATGCCAGAGGAACAGAGAGAAGGGCTCCAGGAAGAACTGATTGACATCATCCTCCTCATCTTGGAGCGCAACCCTCAGCTGCACTACTACCAGGGCTACCATGACATTGTGGTCACATTTCTGCTGGTGGTAGGCGAGAGGCTGGCAACATCCCTGGTAGAAAAATTATCTACCCACCACCTCAGGGATTTTATGGATCCAACAATGGACAACACCAAGCATATATTAAACTATCTGATGCCCATCATTGACCAGGTGAATCCAGAGCTCCATGACTTCATGCAGAGTGCTGAGGTAGGGACCATCTTTGCCCTCAGCTGGCTCATCACCTGGTTTGGGCATGTCCTGTCTGACTTCAGGCACGTCGTGCGGTTATATGACTTCTTCCTGGCCTGCCACCCACTGATGCCGATTTACTTTGCAGCCGTGATTGTGTTGTATCGCGAGCAGGAAGTCCTGGACTGTGACTGTGACATGGCCTCGGTCCACCACCTGTTGTCCCAGATCCCTCAGGACTTGCCCTATGAGACACTGATCAGCAGAGCAGGAGACCTTTTTGTTCAGTTTCCCCCATCCGAACTTGCTCGGGAGGCCGCTGCCCAACAGCAAGCTGAGAGGACGGCAGCCTCTACTTTCAAAGACTTTGAGCTGGCATCAGCCCAGCAGAGGCCTGATATGGTGCTGCGGCAGCGGTTTCGGGGACTTCTGCGGCCTGAAGATCGAACAAAAGATGTCCTGACCAAGCCAAGGACCAACCGCTTTGTGAAATTGGCAGTGATGGGGCTGACAGTGGCACTTGGAGCGGCTGCACTGGCTGTGGTGAAAAGTGCCCTGGAATGGGCCCCTAAGTTTCAGCTGCAGCTGTTTCCCTGA
Amino sequence
MALRSAQGDGPTSGHWDGGAEKADFNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRGLLRPEDRTKDVLTKPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP*