ENST00000453074.6 TRMT6
Information
- Transcript ID
- ENST00000453074.6
- Genome
- hg19
- Position
- chr20:5,918,479-5,931,204
- Strand
- -
- CDS length
- 984
- Amino acid length
- 328
- Gene symbol
- TRMT6
- Gene type
- protein-coding
- Gene description
- tRNA methyltransferase 6 non-catalytic subunit
- Gene Entrez Gene ID
- 51605
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 10 | 5,918,479 | 5,919,372 |
| 9 | 5,921,699 | 5,921,785 |
| 8 | 5,921,889 | 5,921,991 |
| 7 | 5,922,597 | 5,922,682 |
| 6 | 5,923,074 | 5,923,432 |
| 5 | 5,924,205 | 5,924,329 |
| 4 | 5,924,594 | 5,924,677 |
| 3 | 5,924,808 | 5,924,899 |
| 2 | 5,927,052 | 5,927,179 |
| 1 | 5,930,924 | 5,931,204 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 10 | CDS | 5,919,181 | 5,919,372 |
| 9 | CDS | 5,921,699 | 5,921,785 |
| 8 | CDS | 5,921,889 | 5,921,991 |
| 7 | CDS | 5,922,597 | 5,922,682 |
| 6 | CDS | 5,923,074 | 5,923,432 |
| 5 | CDS | 5,924,205 | 5,924,329 |
| 4 | CDS | 5,924,594 | 5,924,625 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 5,937,833 | 5,950,558 | Link |
CDS sequence
ATGTATTATGCAAGAGAACCTGGAAAAATTAACCACATGAGATACGATACACTAGCCCAGATGTTGACGTTGGGAAATATCCGTGCTGGCAACAAAATGATTGTGATGGAAACGTGTGCAGGCTTGGTGCTGGGTGCAATGATGGAACGAATGGGAGGTTTTGGCTCCATTATTCAGCTATACCCTGGAGGAGGACCTGTTCGGGCAGCAACAGCATGTTTTGGATTTCCCAAATCTTTTCTCAGTGGTCTTTATGAATTCCCTCTCAACAAAGTGGACAGTCTTCTACATGGAACATTTTCTGCCAAGATGTTATCTTCAGAGCCAAAAGACAGTGCTTTGGTTGAAGAAAGTAATGGCACACTGGAGGAAAAACAGGCTTCTGAACAAGAGAATGAAGACAGCATGGCAGAGGCCCCAGAGAGCAACCACCCAGAAGACCAGGAAACAATGGAAACAATTTCTCAAGATCCAGAACATAAGGGGCCTAAAGAGAGAGGAAGCAAAAAAGATTATATTCAGGAAAAACAGAGGAGACAAGAAGAGCAGAGGAAAAGACATTTAGAGGCTGCCGCTCTGCTGAGTGAAAGAAACGCAGATGGTTTAATTGTAGCTAGTCGTTTCCACCCCACTCCCCTGCTGCTGTCTTTGCTGGACTTTGTGGCCCCTTCAAGGCCGTTTGTGGTCTACTGTCAGTACAAAGAGCCTCTGTTGGAATGCTACACAAAACTGCGGGAGAGGGGAGGGGTCATCAACCTCAGGCTGTCTGAAACCTGGCTCAGAAATTATCAGGTTTTGCCAGATCGAAGTCATCCTAAACTGCTGATGAGTGGAGGTGGGGGTTATCTTCTCTCCGGCTTCACCGTTGCCATGGACAACCTTAAAGCAGACACCAGCCTCAAATCTAATGCAAGCACTTTAGAATCACACGAGACTGAGGAGCCTGCAGCTAAAAAACGAAAATGCCCAGAGTCTGACTCTTAA
Amino sequence
MYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGPVRAATACFGFPKSFLSGLYEFPLNKVDSLLHGTFSAKMLSSEPKDSALVEESNGTLEEKQASEQENEDSMAEAPESNHPEDQETMETISQDPEHKGPKERGSKKDYIQEKQRRQEEQRKRHLEAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSGFTVAMDNLKADTSLKSNASTLESHETEEPAAKKRKCPESDS*