ENST00000378858.5 LRRN4
Information
- Transcript ID
- ENST00000378858.5
- Genome
- hg19
- Position
- chr20:6,021,192-6,034,706
- Strand
- -
- CDS length
- 2,223
- Amino acid length
- 741
- Gene symbol
- LRRN4
- Gene type
- protein-coding
- Gene description
- leucine rich repeat neuronal 4
- Gene Entrez Gene ID
- 164312
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 6,021,192 | 6,022,892 |
| 4 | 6,025,189 | 6,025,326 |
| 3 | 6,031,425 | 6,031,629 |
| 2 | 6,032,791 | 6,033,450 |
| 1 | 6,034,476 | 6,034,706 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 6,021,668 | 6,022,892 |
| 4 | CDS | 6,025,189 | 6,025,326 |
| 3 | CDS | 6,031,425 | 6,031,629 |
| 2 | CDS | 6,032,791 | 6,033,445 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr20 | 6,040,546 | 6,054,060 | Link |
CDS sequence
ATGCGGCAAACCCTACCGCTGCTGCTGCTGACGGTGCTGCGCCCCAGCTGGGCAGACCCTCCCCAGGAGAAGGTCCCGCTCTTCCGGGTCACTCAGCAGGGCCCCTGGGGGAGCAGTGGCAGCAACGCCACCGACTCGCCCTGCGAGGGGCTGCCCGCCGCGGATGCGACGGCCTTGACCCTGGCGAACCGCAACCTGGAGCGCCTGCCCGGCTGCCTACCGCGCACACTGCGCAGCCTCGACGCCAGCCACAACCTGCTGCGCGCCCTGAGCACTTCCGAGCTCGGCCACCTGGAGCAGCTGCAGGTGCTGACCCTGCGCCACAACCGCATCGCCGCGCTGCGCTGGGGCCCGGGTGGGCCGGCGGGGCTGCACACCCTGGACCTCAGCTACAACCAGCTGGCCGCTCTGCCGCCGTGCACCGGGCCCGCGCTGAGCAGCCTCCGCGCCCTGGCGCTCGCCGGGAATCCGCTGCGGGCGCTGCAGCCCCGGGCCTTCGCCTGCTTCCCCGCGCTGCAGCTCCTCAACCTCTCCTGCACCGCGCTGGGTCGCGGAGCCCAGGGGGGCATCGCCGAGGCGGCGTTCGCTGGAGAGGATGGCGCGCCCCTGGTCACGCTCGAAGTCCTGGATCTCAGCGGCACGTTCCTTGAACGGGTTGAGTCAGGGTGGATCAGAGACCTGCCGAAGCTCACATCCCTCTACCTGAGGAAGATGCCTCGGCTGACGACCCTGGAGGGGGACATTTTCAAGATGACCCCCAACCTGCAGCAGCTGGACTGTCAGGACTCCCCAGCACTTGCTTCTGTCGCCACACACATCTTTCAAGATACTCCACATCTACAGGTCCTTCTGTTCCAGAACTGCAACTTGAGTTCCTTCCCTCCTTGGACCCTGGATTCCTCCCAGGTCCTATCGATCAACCTCTTTGGCAACCCCCTCACTTGCAGTTGTGACTTGTCTTGGCTCCTCACGGATGCAAAGAGAACTGTCCTAAGCAGGGCAGCAGACACTATGTGCGCGCCAGCTGCGGGATCCAGCGGCCCCTTCTCAGCCTCCCTGTCACTCTCCCAGCTGCCCGGAGTGTGCCAGTCCGACCAAAGCACCACTCTCGGGGCTTCACACCCACCTTGCTTCAACCGCTCCACCTACGCACAGGGTACCACCGTCGCGCCCAGCGCAGCCCCCGCCACCCGGCCTGCGGGAGACCAGCAGAGTGTCTCCAAGGCCCCTAACGTGGGCTCTCGCACGATAGCTGCATGGCCGCACAGCGATGCACGGGAGGGGACTGCCCCCTCCACGACCAACTCTGTAGCAGGTCACAGCAACTCCAGCGTTTTCCCCAGGGCTGCCAGCACCACCAGGACCCAGCACCGAGGAGAACATGCCCCCGAGCTTGTCCTTGAGCCTGATATCTCAGCTGCCTCCACCCCACTGGCCAGCAAGCTCCTGGGCCCCTTCCCTACCTCGTGGGACCGCAGCATAAGCTCGCCTCAGCCCGGCCAGAGGACACACGCCACACCCCAAGCCCCCAACCCGAGTCTTTCCGAGGGCGAGATTCCAGTCTTGCTGCTGGACGACTACAGTGAGGAGGAGGAAGGGAGGAAGGAGGAGGTGGGAACGCCTCACCAGGACGTCCCCTGTGATTACCATCCCTGCAAGCACCTGCAGACCCCGTGCGCGGAGCTGCAGAGGCGGTGGCGGTGCCGGTGCCCCGGCCTCAGCGGGGAAGACACCATCCCAGACCCGCCCAGGCTGCAGGGGGTGACGGAGACCACGGACACGTCGGCGCTGGTCCACTGGTGTGCCCCCAACTCGGTAGTGCATGGGTACCAGATCCGCTACTCTGCGGAGGGCTGGGCGGGGAACCAGTCGGTGGTGGGGGTCATCTACGCCACGGCCCGGCAGCACCCTCTGTACGGGCTGTCGCCGGGCACCACCTACCGCGTGTGCGTGCTGGCGGCCAACAGGGCGGGCTTGAGCCAGCCACGGTCTTCGGGCTGGAGGAGCCCGTGCGCCGCCTTCACCACCAAGCCCAGCTTCGCGCTCCTGCTCTCTGGGCTGTGCGCCGCCAGCGGCCTGTTGCTCGCCAGCACCGTGGTGCTGTCCGCATGTCTCTGCAGGCGGGGCCAGACGCTGGGCCTGCAGCGCTGCGACACGCACCTGGTGGCCTACAAAAACCCGGCCTTTGATGATTACCCGCTGGGGCTCCAGACCGTCAGTTAG
Amino sequence
MRQTLPLLLLTVLRPSWADPPQEKVPLFRVTQQGPWGSSGSNATDSPCEGLPAADATALTLANRNLERLPGCLPRTLRSLDASHNLLRALSTSELGHLEQLQVLTLRHNRIAALRWGPGGPAGLHTLDLSYNQLAALPPCTGPALSSLRALALAGNPLRALQPRAFACFPALQLLNLSCTALGRGAQGGIAEAAFAGEDGAPLVTLEVLDLSGTFLERVESGWIRDLPKLTSLYLRKMPRLTTLEGDIFKMTPNLQQLDCQDSPALASVATHIFQDTPHLQVLLFQNCNLSSFPPWTLDSSQVLSINLFGNPLTCSCDLSWLLTDAKRTVLSRAADTMCAPAAGSSGPFSASLSLSQLPGVCQSDQSTTLGASHPPCFNRSTYAQGTTVAPSAAPATRPAGDQQSVSKAPNVGSRTIAAWPHSDAREGTAPSTTNSVAGHSNSSVFPRAASTTRTQHRGEHAPELVLEPDISAASTPLASKLLGPFPTSWDRSISSPQPGQRTHATPQAPNPSLSEGEIPVLLLDDYSEEEEGRKEEVGTPHQDVPCDYHPCKHLQTPCAELQRRWRCRCPGLSGEDTIPDPPRLQGVTETTDTSALVHWCAPNSVVHGYQIRYSAEGWAGNQSVVGVIYATARQHPLYGLSPGTTYRVCVLAANRAGLSQPRSSGWRSPCAAFTTKPSFALLLSGLCAASGLLLASTVVLSACLCRRGQTLGLQRCDTHLVAYKNPAFDDYPLGLQTVS*