ENST00000270115.8 LRRC56

Information
Transcript ID
ENST00000270115.8
Genome
hg38
Position
chr11:537,527-554,912
Strand
+
CDS length
1,629
Amino acid length
543
Gene symbol
LRRC56
Gene type
protein-coding
Gene description
leucine rich repeat containing 56
Gene Entrez Gene ID
115399
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 537,527 537,605
2 538,598 538,860
3 539,580 539,726
4 540,674 540,861
5 541,537 541,624
6 544,720 544,780
7 549,902 549,998
8 550,072 550,272
9 551,131 551,302
10 551,651 551,827
11 551,903 551,967
12 552,090 552,232
13 552,569 552,702
14 553,963 554,912
CDS
Exon number Type Start Stop
4 CDS 540,685 540,861
5 CDS 541,537 541,624
6 CDS 544,720 544,780
7 CDS 549,902 549,998
8 CDS 550,072 550,272
9 CDS 551,131 551,302
10 CDS 551,651 551,827
11 CDS 551,903 551,967
12 CDS 552,090 552,232
13 CDS 552,569 552,702
14 CDS 553,963 554,276
Other genome
Genome Chromosome Start End Links
hg19 chr11 537,527 554,912 Link
CDS sequence
ATGGATCTGGGCTGGGACAGATCCCGTGGGCCTCGGCGGAGCACCTCCAGCGTCCGGGTGCGGGAGCTGAGCTGGCAAGGCCTGCACAACCCCTGCCCACAGAGCAAGGGCCCTGGCAGTCAGAGGGACAGACTTGGAGAGCAGCTGGTGGAAGAGTACCTGTCCCCTGCCCGGCTGCAGGCCCTGGCCCGGGTGGATGACCTTCGGCTGGTGAGGACGCTGGAGATGTGTGTGGACACTCGTGAGGGCAGCCTGGGGAACTTTGGGGTGCACCTGCCCAACCTGGACCAACTGAAGCTGAACGGCAGCCACCTGGGCTCCCTGAGGGACTTGGGCACGTCTCTGGGCCACCTGCAGGTGCTGTGGCTGGCTCGCTGTGGCCTCGCTGACCTGGATGGCATCGCCTCTTTGCCAGCACTTAAGGAACTCTACGCCTCCTACAACAACATCTCGGACCTGAGCCCACTGTGCCTGCTGGAACAATTGGAGGTGCTGGACCTGGAGGGCAACAGCGTGGAGGACCTGGGGCAGGTGCGCTACTTGCAGCTGTGCCCACGCCTGGCCATGCTCACCCTGGAGGGCAACCTGGTGTGCCTACAGCCGGCCCCTGGCCCCACCAACAAGGTGCCCAGGGGCTACAACTACAGGGCAGAGGTGAGGAAGCTCATTCCCCAGCTGCAGGTCCTGGACGAAGTGCCGGCCGCACACACAGGCCCACCGGCCCCCCCGCGGCTGAGCCAGGACTGGCTTGCGGTGAAGGAGGCCATCAAGAAGGGCAACGGCCTTCCCCCGCTGGACTGTCCCCGTGGAGCCCCCATCCGGAGACTTGACCCCGAGCTGTCCCTGCCTGAGACGCAGTCCCGGGCCTCCAGGCCCTGGCCCTTCTCCCTGCTGGTCCGTGGGGGCCCCCTGCCTGAAGGCCTGCTTTCTGAGGACCTGGCCCCAGAAGATAACACCAGCAGCCTCACCCATGGTGCTGGCCAAGTCCTCTGTGGGAACCCCACCAAGGGCCTGCGGGAGCGTAGGCACCAGTGCCAGGCCAGGGAGCCCCCCGAGCAGCTGCCCCAACACAGGCCAGGAGATCCGGCCGCCAGCACTTCCACCCCAGAGCCTGACCCTGCAGACAGCTCTGACTTCCTGGCCTTGGCTGGGCTCAGGGCCTGGAGGGAACATGGCGTGCGCCCCCTCCCCTATAGGCACCCGGAGTCCCAACAGGAAGGGGCTGTAGCCCCCTGGGGCCCACGGAGGGTCCCTGAAGAGCAAGTGCACCAGGCAGAGCCCAAGACTCCCTCCAGCCCCCCAAGCCTGGCCTCAGAGCCCTCCGGGACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGTCGACAGACCTGCAGTCCAGGGGGCGTCGGCTCCGAGTCCTGGGCAGCTGGGGGCCTGGCCTGGGTGATGGGGTGGCTGCAGTGCCTGTCCTGAGAGCCCTGGAGGTGGCCTCACGCCTGAGCCCTCGAGCCCAGGGATGTCCTGGCCCAAAGCCAGCACCAGATGCAGCAGCTAGACCTCCCAGGGCAGCTGAACTCTCTCACCCCAGCCCCGTCCCCACTTAA
Amino sequence
MDLGWDRSRGPRRSTSSVRVRELSWQGLHNPCPQSKGPGSQRDRLGEQLVEEYLSPARLQALARVDDLRLVRTLEMCVDTREGSLGNFGVHLPNLDQLKLNGSHLGSLRDLGTSLGHLQVLWLARCGLADLDGIASLPALKELYASYNNISDLSPLCLLEQLEVLDLEGNSVEDLGQVRYLQLCPRLAMLTLEGNLVCLQPAPGPTNKVPRGYNYRAEVRKLIPQLQVLDEVPAAHTGPPAPPRLSQDWLAVKEAIKKGNGLPPLDCPRGAPIRRLDPELSLPETQSRASRPWPFSLLVRGGPLPEGLLSEDLAPEDNTSSLTHGAGQVLCGNPTKGLRERRHQCQAREPPEQLPQHRPGDPAASTSTPEPDPADSSDFLALAGLRAWREHGVRPLPYRHPESQQEGAVAPWGPRRVPEEQVHQAEPKTPSSPPSLASEPSGTSSQHLVPSPPKHPRPRDSGSSSPRWSTDLQSRGRRLRVLGSWGPGLGDGVAAVPVLRALEVASRLSPRAQGCPGPKPAPDAAARPPRAAELSHPSPVPT*