ENST00000672280.1 PRIM1

Information
Transcript ID
ENST00000672280.1
Genome
hg38
Position
chr12:56,731,296-56,752,374
Strand
-
CDS length
1,380
Amino acid length
460
Gene symbol
PRIM1
Gene type
protein-coding
Gene description
DNA primase subunit 1
Gene Entrez Gene ID
5557
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
14 56,731,296 56,731,734
13 56,734,147 56,734,245
12 56,738,434 56,738,525
11 56,739,294 56,739,363
10 56,740,012 56,740,128
9 56,741,435 56,741,576
8 56,741,746 56,741,837
7 56,742,987 56,743,096
6 56,744,065 56,744,123
5 56,746,045 56,746,181
4 56,746,781 56,746,854
3 56,746,926 56,747,032
2 56,751,038 56,751,195
1 56,752,196 56,752,374
CDS
Exon number Type Start Stop
14 CDS 56,731,715 56,731,734
13 CDS 56,734,147 56,734,245
12 CDS 56,738,434 56,738,525
11 CDS 56,739,294 56,739,363
10 CDS 56,740,012 56,740,128
9 CDS 56,741,435 56,741,576
8 CDS 56,741,746 56,741,837
7 CDS 56,742,987 56,743,096
6 CDS 56,744,065 56,744,123
5 CDS 56,746,045 56,746,181
4 CDS 56,746,781 56,746,854
3 CDS 56,746,926 56,747,032
2 CDS 56,751,038 56,751,195
1 CDS 56,752,196 56,752,298
Other genome
Genome Chromosome Start End Links
hg19 chr12 57,125,080 57,146,158 Link
CDS sequence
ATGGAGACGTTTGACCCCACCGAGCTGCCCGAGCTGCTTAAACTTTATTACCGGAGGCTCTTTCCCTACTCTCAGTACTATCGCTGGCTCAACTACGGTGGAGTGATAAAGAATTACTTTCAACACCGTGAATTTTCATTCACATTGAAAGATGATATTTACATTCGCTACCAATCCTTCAACAACCAGAGTGATCTGGAAAAGGAGATGCAGAAAATGAATCCATACAAGATTGATATAGGCGCAGTATATTCTCACAGACCCAATCAACACAATACAGTGAAGCTGGGAGCTTTCCAGGCTCAGGAAAAAGAACTGGTATTTGACATTGACATGACAGACTATGACGATGTGAGGAGATGTTGTAGTTCTGCAGACATATGTCCTAAGTGCTGGACCCTCATGACAATGGCCATACGCATCATTGACAGAGCATTGAAGGAGGACTTTGGATTTAAGCATCGTCTCTGGGTATATTCTGGAAGGAGAGGTGTTCATTGTTGGGTCTGTGATGAATCAGTTAGAAAACTGTCTTCTGCAGTACGTTCTGGGATAGTTGAGTATTTGAGCCTTGTAAAGGGTGGTCAAGACGTTAAAAAGAAAGTTCACCTAAGTGAAAAAATTCACCCTTTTATCAGAAAATCTATAAACATAATAAAAAAATACTTTGAAGAATATGCCTTGGTTAATCAAGATATTCTCGAAAATAAAGAAAGCTGGGATAAGATTTTAGCCCTTGTTCCTGAAACAATTCATGATGAACTTCAACAAAGCTTCCAAAAGTCTCACAATTCACTTCAGCGTTGGGAGCACTTGAAGAAAGTAGCCAGCAGATATCAGAATAACATCAAAAATGACAAATATGGACCCTGGCTGGAGTGGGAGATTATGCTCCAGTACTGTTTTCCACGGCTGGATATCAATGTCAGCAAAGGAATCAATCATCTACTGAAGAGCCCTTTTAGTGTTCATCCTAAAACAGAGTCCCACTCTGTCACCCAGGCTGGAGTACAGTGGCGCGATCTTGGCTCACTGCAGCCTCTGCCTTCCAGGTTCAAGCAATTCTCTGCCTCACCCTCCCAAGTAGCTGGGATTACAGGTCGCATATCTGTGCCTATTGATTTGCAGAAAGTGGACCAGTTTGATCCATTTACTGTTCCGACCATAAGCTTCATCTGCCGTGAATTGGATGCCATTTCCACTAATGAAGAGGAAAAAGAGGAGAATGAAGCTGAATCTGATGTCAAACATAGAACCAGAGATTATAAGAAGACCAGTCTAGCACCTTATGTGAAAGTTTTTGAACATTTTCTTGAAAATCTGGATAAATCCCGAAAAGGAGAACTTCTTAAGAAGAGTGATTTACAAAAAGATTTCTGA
Amino sequence
METFDPTELPELLKLYYRRLFPYSQYYRWLNYGGVIKNYFQHREFSFTLKDDIYIRYQSFNNQSDLEKEMQKMNPYKIDIGAVYSHRPNQHNTVKLGAFQAQEKELVFDIDMTDYDDVRRCCSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGIVEYLSLVKGGQDVKKKVHLSEKIHPFIRKSINIIKKYFEEYALVNQDILENKESWDKILALVPETIHDELQQSFQKSHNSLQRWEHLKKVASRYQNNIKNDKYGPWLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTESHSVTQAGVQWRDLGSLQPLPSRFKQFSASPSQVAGITGRISVPIDLQKVDQFDPFTVPTISFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVFEHFLENLDKSRKGELLKKSDLQKDF*