ENST00000679233.1 NPM1

Information
Transcript ID
ENST00000679233.1
Genome
hg38
Position
chr5:171,387,843-171,406,736
Strand
+
CDS length
588
Amino acid length
196
Gene symbol
NPM1
Gene type
protein-coding
Gene description
nucleophosmin 1
Gene Entrez Gene ID
4869
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 171,387,843 171,388,006
2 171,390,051 171,390,130
3 171,391,305 171,391,424
4 171,391,706 171,391,799
5 171,392,710 171,392,816
6 171,392,914 171,392,978
7 171,405,302 171,405,403
8 171,406,397 171,406,736
CDS
Exon number Type Start Stop
1 CDS 171,387,949 171,388,006
2 CDS 171,390,051 171,390,130
3 CDS 171,391,305 171,391,424
4 CDS 171,391,706 171,391,799
5 CDS 171,392,710 171,392,816
6 CDS 171,392,914 171,392,978
7 CDS 171,405,302 171,405,365
Other genome
Genome Chromosome Start End Links
hg19 chr5 170,814,847 170,833,740 Link
CDS sequence
ATGGAAGATTCGATGGACATGGACATGAGCCCCCTGAGGCCCCAGAACTATCTTTTCGGTTGTGAACTAAAGGCCGACAAAGATTATCACTTTAAGGTGGATAATGATGAAAATGAGCACCAGTTATCTTTAAGAACGGTCAGTTTAGGGGCTGGTGCAAAGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATTACGAAGGCAGTCCAATTAAAGTAACACTGGCAACTTTGAAAATGTCTGTACAGCCAACGGTTTCCCTTGGGGGCTTTGAAATAACACCACCAGTGGTCTTAAGGTTGAAGTGTGGTTCAGGGCCAGTGCATATTAGTGGACAGCACTTAGTAGCTGTGGAGGAAGATGCAGAGTCAGAAGATGAAGAGGAGGAGGATGTGAAACTCTTAAGTATATCTGGAAAGCGGTCTGCCCCTGGAGGTGGTAGCAAGGTTCCACAGAAAAAAGTAAAACTTGCTGCTGATGAAGATGATGACGATGATGATGAAGAGGATGATGATGAAGAGGACAAGAATCCTTCAAGAAACAGGAAAAAACTCCTAAAACACCAAAAGGACCTAGTTCTGTAG
Amino sequence
MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEEDKNPSRNRKKLLKHQKDLVL*