ENST00000553930.5 SDR39U1
Information
- Transcript ID
- ENST00000553930.5
- Genome
- hg38
- Position
- chr14:24,439,779-24,442,858
- Strand
- -
- CDS length
- 507
- Amino acid length
- 169
- Gene symbol
- SDR39U1
- Gene type
- protein-coding
- Gene description
- short chain dehydrogenase/reductase family 39U member 1
- Gene Entrez Gene ID
- 56948
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 24,439,779 | 24,440,601 |
| 5 | 24,440,783 | 24,440,926 |
| 4 | 24,441,674 | 24,441,795 |
| 3 | 24,442,178 | 24,442,260 |
| 2 | 24,442,346 | 24,442,452 |
| 1 | 24,442,813 | 24,442,858 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 24,440,083 | 24,440,589 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr14 | 24,908,985 | 24,912,064 | Link |
CDS sequence
ATGGGGAGAGTGAGGAAGGGGAAACAGAAACCAGGAGGAGCAGTGGGCTCCTTCAAGGCTGAGAGGACCCCTGTACCTTCCCTCTTTCCTGCTCTAGGGGTTGTGCTGGGCCGTGGGGGTGGTGCCATGGGCCACATGCTGCTGCCCTTTCGCCTGGGCCTGGGGGGCCCCATCGGCTCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCCTGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAATGCTGAGTTTGCCCAGACCTTGGGTGCTGCCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACAGCGAACACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGCTGCCTTAAAGGAAATTGTAGCCTAA
Amino sequence
MGRVRKGKQKPGGAVGSFKAERTPVPSLFPALGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTLGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPQRTLATGYQYSFPELGAALKEIVA*