ENST00000623385.3 TRIM39-RPP21

Information
Transcript ID
ENST00000623385.3
Genome
hg38
Position
chr6:30,328,907-30,346,854
Strand
+
CDS length
1,512
Amino acid length
504
Gene symbol
TRIM39-RPP21
Gene type
protein-coding
Gene description
TRIM39-RPP21 readthrough
Gene Entrez Gene ID
202658
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 30,328,907 30,329,041
2 30,329,311 30,329,770
3 30,330,781 30,330,876
4 30,335,745 30,335,975
5 30,339,908 30,339,930
6 30,340,505 30,340,620
7 30,341,712 30,341,896
8 30,345,298 30,345,398
9 30,345,491 30,345,573
10 30,346,432 30,346,557
11 30,346,713 30,346,854
CDS
Exon number Type Start Stop
2 CDS 30,329,318 30,329,770
3 CDS 30,330,781 30,330,876
4 CDS 30,335,745 30,335,975
5 CDS 30,339,908 30,339,930
6 CDS 30,340,505 30,340,620
7 CDS 30,341,712 30,341,896
8 CDS 30,345,298 30,345,398
9 CDS 30,345,491 30,345,573
10 CDS 30,346,432 30,346,557
11 CDS 30,346,713 30,346,810
Other genome
Genome Chromosome Start End Links
hg19 chr6 30,296,684 30,314,631 Link
CDS sequence
ATGGCAGAGACAAGTCTGTTAGAGGCTGGGGCCTCTGCAGCCTCTACAGCTGCGGCTTTGGAGAACTTACAGGTGGAGGCGAGCTGCTCTGTGTGCCTGGAGTATCTGAAGGAACCTGTCATCATTGAGTGTGGGCACAACTTCTGCAAAGCTTGCATCACCCGCTGGTGGGAGGACCTAGAGAGGGACTTCCCTTGTCCTGTCTGTCGAAAGACATCCCGCTACCGCAGTCTCCGACCTAATCGGCAACTAGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGGAAGATCCGGGATGAGAGCCTCTGCCCCCAACACCATGAGGCCCTCAGCCTTTTCTGTTATGAGGACCAGGAGGCTGTATGCTTGATATGTGCAATTTCCCACACCCACCGGGCCCACACCGTTGTGCCACTGGACGATGCTACACAGGAGTACAAGGAAAAACTGCAGAAGTGTCTGGAGCCCCTGGAACAGAAGCTGCAGGAGATCACTCGCTGCAAGTCCTCTGAGGAGAAGAAGCCTGGTGAGCTCAAGAGACTAGTGGAAAGTCGCCGACAGCAGATCTTGAGGGAGTTTGAAGAGCTTCATAGGCGGCTGGATGAAGAGCAGCAGGTGTTGCTTTCACGACTGGAAGAAGAGGAACAGGACATTCTGCAGCGACTCCGAGAAAATGCTGCTCACCTTGGGGACAAGCGCCGGGACCTGGCCCACTTGGCTGCCGAGGTGGAGGGCAAGTGCTTACAGTCAGGCTTCGAGATGCTTAAGGATGTCAAAAGTACCCTGGAAAAATGTGAAAAGGTGAAGACCATGGAGGTGACTTCAGTATCCATAGAGCTGGAAAAGAACTTCAGCAATTTTCCCCGACAGTACTTTGCCCTAAGGAAAATCCTTAAACAGCTAATTGCGGATGTGACCCTGGACCCTGAGACAGCTCATCCTAACCTAGTCCTGTCAGAGGATCGTAAGAGCGTCAAGTTCGTGGAGACAAGACTCCGGGATCTCCCTGACACACCAAGGCGTTTCACCTTCTACCCTTGCGTCCTGGCTACTGAGGGTTTCACCTCAGGTCGACACTACTGGGAGGTGGAGGCCGCCCATTGTGTCCTTGCCCAGGACCCCGAGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGGATCCCTCGGTGAAGAGGACTCTCTGTCGAGGCTGCTCTTCCCTCCTCGTCCCGGGCCTCACCTGCACCCAGCGCCAGAGACGCTGCAGGGGACAGCGCTGGACCGTACAGACCTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGGAGACAGGCCTGAGGCCCAGCTCGGGAGCCAAGCAGATTCCAAACCACTACAACCCTTGCCAAACACAGCCCACTCCATTTCAGACCGCCTTCCTGAGGAGAAAATGCAGACTCAGGGTTCCAGTAACCAGTGA
Amino sequence
MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEAAHCVLAQDPENQALARFYCYTERTIAKRLVLRRDPSVKRTLCRGCSSLLVPGLTCTQRQRRCRGQRWTVQTCLTCQRSQRFLNDPGHLLWGDRPEAQLGSQADSKPLQPLPNTAHSISDRLPEEKMQTQGSSNQ*