ENST00000412678.7 CDHR4

Information
Transcript ID
ENST00000412678.7
Genome
hg38
Position
chr3:49,790,732-49,799,873
Strand
-
CDS length
2,367
Amino acid length
789
Gene symbol
CDHR4
Gene type
protein-coding
Gene description
cadherin related family member 4
Gene Entrez Gene ID
389118
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
19 49,790,732 49,790,887
18 49,791,441 49,791,468
17 49,791,714 49,791,801
16 49,791,903 49,791,959
15 49,792,468 49,792,610
14 49,792,854 49,793,074
13 49,793,161 49,793,311
12 49,793,583 49,793,722
11 49,793,803 49,794,006
10 49,794,608 49,794,701
9 49,794,947 49,795,100
8 49,795,196 49,795,379
7 49,795,628 49,795,764
6 49,795,943 49,796,046
5 49,796,922 49,797,032
4 49,798,826 49,798,917
3 49,798,994 49,799,156
2 49,799,247 49,799,437
1 49,799,764 49,799,873
CDS
Exon number Type Start Stop
19 CDS 49,790,832 49,790,887
18 CDS 49,791,441 49,791,468
17 CDS 49,791,714 49,791,801
16 CDS 49,791,903 49,791,959
15 CDS 49,792,468 49,792,610
14 CDS 49,792,854 49,793,074
13 CDS 49,793,161 49,793,311
12 CDS 49,793,583 49,793,722
11 CDS 49,793,803 49,794,006
10 CDS 49,794,608 49,794,701
9 CDS 49,794,947 49,795,100
8 CDS 49,795,196 49,795,379
7 CDS 49,795,628 49,795,764
6 CDS 49,795,943 49,796,046
5 CDS 49,796,922 49,797,032
4 CDS 49,798,826 49,798,917
3 CDS 49,798,994 49,799,156
2 CDS 49,799,247 49,799,437
1 CDS 49,799,764 49,799,812
Other genome
Genome Chromosome Start End Links
hg19 chr3 49,828,165 49,837,306 Link
CDS sequence
ATGGTGCTGCTCAGGCTCCTCGTGTTCCTCTTTGCTCCGGTGGTCTCTGACCTCTGCAGCCTGCCCTGCTTTATAAATGTCTCTGAGAGCCAGGGCCCTGGCACAGTCCTTCAGTTTTTATCCTTCAACTGCTCCTCCTACACGCCCACACCCACCCTGGAGTTGCTCAATGTCCAGCCACCCACCACCTTCTTCAACCCACCCAGCTTGGCCAGGTGGCAAGGGACCTATGTGGGCAAGTTGACCTTGAGCAGCTCTGCTCAGTTGGATGCCCTGATGGTGAACCACTACAAGGTGCAGCTGAAGTTCACATGTGGCAACCATGTGATGGAGGGCTCACTCTCTGTGGATGTGCAGCGGGACCTTAGCCATATCCAGTGTGCTGGTCAATTTGCCAGCCCAGCTGGGGAAATGATTCAGGTGCCAGAGACAGTCACACCTGGGGCTCGGCTGTACACTCTGCTCCTCCCAGGCCTAGAACTCCACGGAGCGCAGATGAGCATTATCAGTGCCCAGGACCTGCCACACTTCCCTGGACCTTTCTCCATCAATGAGCAAGGTTGGCTGCAGGCACCATCCCAGGGCCTCCTAGGCCAGGCTCAAAAGGTCTTCCAGCTGCAAATCTCAGTGTCCTTTGGACAAAGGCAAAGCTGCCAAGGGATGGTGATAGTGAAGGTTTTGCCTGTTCCCTCCAGCCAGGTCTCCTTCCTCGAGCAGGCTCAGAATATCACCATCCCTGAGAATCTGGCCCCCGGTAGTGAGGTGGTTCAGGTCCAGGCCCGGGGTGTCGACCTGCGCTATGAAATCCTGTCTCCGGTGCCCAGCCCACTCTTCTCCATTGGTCGTGCAGACGGTGTGGTCCGGACCACCACGCCCCTAGAGTTAGCTCGCACCTCAGGCACCGCGGTCTCCAGGCTGCAGGTGAAGGCCTTTGAGCAGGGCCAGCTGTGGGCCAGTGCCAAGCTCAATCTCACCATGAATGTGCAGCTGGTCAACCTCTGGCCTCCACGCTGCCTCCCAGCGCTTCTGGTGTCCCAAATCCCGGAGACTGCACCCGTGGGCACCGTGCTGAATACTCTCACTTGCGAAGATCCGGACTCTGTTGGTGCCACCCTGGACTACAAGCTGTGGTTCCGCAGCTCTTCCAACCCTGCCAGCCTCTGCCTTTATGACAGAGTCCTTGAGGTGAATGCCACACTGGACTGTGACACTCCTGGAGCCTGCTTCCAGCATGCAGCCTCCATCCTGGTGCTCGATGGTGGCCAGCCCCAGATGACCACTGAGGTGCCGGTACTGGTGATGGTGACACCCATCAACGAGTTCTCCCCAGCCTGTGCCCCTCGCACGTTCCGGGTTCAGGAGGATGCGGCGCCCCACACTCTACTGGGCTCCGTGGTGGGCACGGATATGGATTACCCTCATGACAACATTGAGTACTACACCTCTGGTGGTCCTACCACCTTTGCTGTGGACCGTCTCAGCGGGGAAGTTCACCTCCTGGGACCTTTGGACTATGAGCAGCAGAGGCTGTACAGGCTCACTGTCCTTGTGATTGACCATGGCCAAGACCAGAACCCCAACCATCACCTCTCAGGCTCCTGTACCATTACCATCGAGGTTGAGGATGTGAATGACCATGCCCCCGAGTGTGAGCCCCCATTTCAGGAACTCACCATCTATGCTCCTCTGGGCCGTAGCGTGGAGGTGACCAAGATGTCATGCCAGATCCCTCAGGAGCCACAGCGCCTGATCTACTCCTATAGCATCGTGGGAGGGAATAGCCAGAACCGATTCATCCTGCAAGGGGCCATCCTGGTGCACAGTGACCTTGTGTTGGGGCCGTTCTGGCCAGAGCAGCCCCGTACCTATGAGCTACTGATCTGTGTGGCCGATGCAGGCCCCTCCACCCCCCACCTCAGCACCACAGCCACCATTATTGTGCATCTAGTTCCCCGGAGGGCCAGCACAGTGGCCACCAGCACCCACAGAACCACAGTGCCCTCAACGATGACACCCATGCTCGTGACAGACACAGAGGCTTTCTGGCAGCCACAGCCCTGGTTTGTGGTGGTGTTGACAGCAACTGGTGCTCTTCTCCTCTTGGCCCTAGGCTGGCTTCTTGGCAGGCTCCTCCAGGGGTTGGCCCAGCTGCTGCAAGCACCCAGCAAACCAGCCCAGGCTTTGCTGCTAAACAGCATCCAGGGAACTGAGGGATCCATCGAGGGTTTCCTGGAGGCACCGAAGATGGAGATGTCCCAGGCACCCAGCAGTGTCATGAGTCTGCATTTTGATGGCAGAGCACAGGACTCCCGTACCGGAAGAGACTACCTGTTTAACACACACACAGGAGCCCGGCGCTGGCTCTGA
Amino sequence
MVLLRLLVFLFAPVVSDLCSLPCFINVSESQGPGTVLQFLSFNCSSYTPTPTLELLNVQPPTTFFNPPSLARWQGTYVGKLTLSSSAQLDALMVNHYKVQLKFTCGNHVMEGSLSVDVQRDLSHIQCAGQFASPAGEMIQVPETVTPGARLYTLLLPGLELHGAQMSIISAQDLPHFPGPFSINEQGWLQAPSQGLLGQAQKVFQLQISVSFGQRQSCQGMVIVKVLPVPSSQVSFLEQAQNITIPENLAPGSEVVQVQARGVDLRYEILSPVPSPLFSIGRADGVVRTTTPLELARTSGTAVSRLQVKAFEQGQLWASAKLNLTMNVQLVNLWPPRCLPALLVSQIPETAPVGTVLNTLTCEDPDSVGATLDYKLWFRSSSNPASLCLYDRVLEVNATLDCDTPGACFQHAASILVLDGGQPQMTTEVPVLVMVTPINEFSPACAPRTFRVQEDAAPHTLLGSVVGTDMDYPHDNIEYYTSGGPTTFAVDRLSGEVHLLGPLDYEQQRLYRLTVLVIDHGQDQNPNHHLSGSCTITIEVEDVNDHAPECEPPFQELTIYAPLGRSVEVTKMSCQIPQEPQRLIYSYSIVGGNSQNRFILQGAILVHSDLVLGPFWPEQPRTYELLICVADAGPSTPHLSTTATIIVHLVPRRASTVATSTHRTTVPSTMTPMLVTDTEAFWQPQPWFVVVLTATGALLLLALGWLLGRLLQGLAQLLQAPSKPAQALLLNSIQGTEGSIEGFLEAPKMEMSQAPSSVMSLHFDGRAQDSRTGRDYLFNTHTGARRWL*