ENST00000652959.1 CASC16
Information
- Transcript ID
- ENST00000652959.1
- Genome
- hg38
- Position
- chr16:52,552,182-52,652,132
- Strand
- -
- CDS length
- 0
- Amino acid length
- 0
- Gene symbol
- CASC16
- Gene type
- ncRNA
- Gene description
- cancer susceptibility 16
- Gene Entrez Gene ID
- 643714
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 52,552,182 | 52,552,434 |
| 6 | 52,562,814 | 52,562,862 |
| 5 | 52,573,181 | 52,573,344 |
| 4 | 52,590,936 | 52,591,067 |
| 3 | 52,630,950 | 52,631,046 |
| 2 | 52,648,052 | 52,648,112 |
| 1 | 52,651,952 | 52,652,132 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr16 | 52,586,094 | 52,686,044 | Link |
CDS sequence
Amino sequence