ENST00000546625.5 TCP11L2
Information
- Transcript ID
- ENST00000546625.5
- Genome
- hg38
- Position
- chr12:106,302,818-106,325,913
- Strand
- +
- CDS length
- 819
- Amino acid length
- 273
- Gene symbol
- TCP11L2
- Gene type
- protein-coding
- Gene description
- t-complex 11 like 2
- Gene Entrez Gene ID
- 255394
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 106,302,818 | 106,302,941 |
| 2 | 106,311,041 | 106,311,232 |
| 3 | 106,314,358 | 106,314,493 |
| 4 | 106,318,344 | 106,318,464 |
| 5 | 106,321,486 | 106,321,706 |
| 6 | 106,323,510 | 106,325,913 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 106,311,076 | 106,311,232 |
| 3 | CDS | 106,314,358 | 106,314,493 |
| 4 | CDS | 106,318,344 | 106,318,464 |
| 5 | CDS | 106,321,486 | 106,321,706 |
| 6 | CDS | 106,323,510 | 106,323,693 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 106,696,596 | 106,719,691 | Link |
CDS sequence
ATGCCCTTCAATGGCGAGAAGCAGTGTGTGGGAGAGGACCAGCCAAGCGATTCTGATTCTTCCCGGTTTTCCGAAAGCATGGCTTCGCTCAGTGACTATGAATGCTCCAGGCAGAGCTTTGCAAGTGACTCCTCCAGCAAATCCAGCTCTCCTGCTTCAACAAGCCCTCCAAGGGTTGTAACATTTGATGAAGTGATGGCTACAGCAAGGAACTTATCAAACTTGACTCTTGCTCATGAGATTGCTGTAAATGAGAACTTTCAATTGAAACAAGAGGCTCTCCCAGAAAAGAGTTTGGCTGGTCGAGTGAAGCACATTGTTCACCAGGCCTTCTGGGACGTCTTGGATTCAGAACTAAATGCTGACCCTCCTGAGTTTGAACATGCCATCAAACTGTTTGAAGAAATCAGAGAGATTCTTCTCTCTTTTCTCACTCCCGGTGGCAACCGGCTTCGCAACCAAATCTGTGAAGTTTTGGACACAGACCTCATTAGGCAGCAGGCTGAGCACAGTGCTGTTGACATCCAAGGCCTGGCCAACTATGTCATCAGTACGATGGGAAAGCTGTGTGCTCCCGTGCGAGATAATGATATCAGAGAGTTAAAGGCTACTGGCAACATCGTGGAGGTGCTGAGACAAATATTCCATGTCCTGGACCTCATGCAAATGGACATGGCCAATTTTACAATTATGAGTCTCAGACCGCACCTTCAACGCCAGTTGGTGGAATATGAGAGAACCAAGTTCCAGGAAATTTTGGAAGAAACTCCAAGTGAGTATAATATAATGTGTATTTATATTGAAATTAGGTTAAAATGA
Amino sequence
MPFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDEVMATARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAFWDVLDSELNADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHVLDLMQMDMANFTIMSLRPHLQRQLVEYERTKFQEILEETPSEYNIMCIYIEIRLK*