ENST00000376227.4 CCDC22

Information
Transcript ID
ENST00000376227.4
Genome
hg38
Position
chrX:49,235,470-49,250,520
Strand
+
CDS length
1,884
Amino acid length
628
Gene symbol
CCDC22
Gene type
protein-coding
Gene description
coiled-coil domain containing 22
Gene Entrez Gene ID
28952
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 49,235,470 49,235,686
2 49,237,086 49,237,263
3 49,242,016 49,242,148
4 49,242,886 49,242,992
5 49,243,118 49,243,184
6 49,243,284 49,243,462
7 49,246,731 49,246,925
8 49,247,496 49,247,558
9 49,247,649 49,247,768
10 49,248,191 49,248,310
11 49,248,407 49,248,523
12 49,248,633 49,248,734
13 49,248,817 49,248,924
14 49,249,167 49,249,262
15 49,249,509 49,249,568
16 49,249,651 49,249,725
17 49,250,148 49,250,520
CDS
Exon number Type Start Stop
1 CDS 49,235,637 49,235,686
2 CDS 49,237,086 49,237,263
3 CDS 49,242,016 49,242,148
4 CDS 49,242,886 49,242,992
5 CDS 49,243,118 49,243,184
6 CDS 49,243,284 49,243,462
7 CDS 49,246,731 49,246,925
8 CDS 49,247,496 49,247,558
9 CDS 49,247,649 49,247,768
10 CDS 49,248,191 49,248,310
11 CDS 49,248,407 49,248,523
12 CDS 49,248,633 49,248,734
13 CDS 49,248,817 49,248,924
14 CDS 49,249,167 49,249,262
15 CDS 49,249,509 49,249,568
16 CDS 49,249,651 49,249,725
17 CDS 49,250,148 49,250,261
Other genome
Genome Chromosome Start End Links
hg19 chrX 49,091,930 49,106,981 Link
CDS sequence
ATGGAGGAGGCGGACCGAATCCTCATCCATTCGCTGCGCCAGGCCGGCACGGCAGTTCCTCCAGATGTGCAGACCTTGCGCGCCTTCACCACTGAGCTGGTTGTAGAGGCTGTGGTCCGCTGCCTGCGTGTGATCAACCCTGCGGTGGGCTCTGGCCTCAGCCCTCTGCTGCCTCTTGCCATGTCTGCCCGGTTCCGCCTGGCCATGAGCCTGGCTCAGGCCTGCATGGACCTGGGCTATCCCTTGGAGCTTGGCTATCAGAACTTCCTCTACCCCAGTGAGCCTGACCTCCGAGACCTGCTTCTCTTCTTGGCTGAGCGTCTGCCCACCGATGCCTCTGAGGATGCAGACCAGCCTGCAGGTGACTCAGCTATTCTCCTCCGGGCCATTGGGAGCCAAATTCGGGACCAGCTGGCACTGCCTTGGGTCCCGCCCCACCTTCGCACTCCCAAGCTGCAGCACCTCCAGGGCTCGGCCCTCCAGAAGCCTTTCCATGCCAGCAGGCTGGTCGTGCCAGAATTGAGTTCCAGAGGTGAGCCACGGGAGTTCCAGGCGAGTCCCCTGCTGCTTCCAGTCCCTACCCAGGTGCCTCAGCCTGTTGGAAGGGTGGCCTCGCTCCTCGAACACCATGCCCTGCAGCTCTGCCAGCAGACGGGCCGGGACCGGCCAGGGGATGAGGACTGGGTCCACCGGACATCCCGCCTCCCACCCCAGGAGGACACACGGGCTCAGCGGCAGCGGCTGCAAAAGCAACTGACTGAGCATCTGCGCCAAAGCTGGGGCCTGCTTGGGGCCCCCATACAAGCCCGGGACCTGGGAGAACTGCTGCAGGCCTGGGGTGCTGGGGCCAAGACTGGTGCTCCTAAGGGCTCCCGCTTCACGCACTCAGAGAAGTTCACCTTCCATCTGGAGCCCCAGGCCCAGGCCACTCAGGTGTCAGATGTGCCAGCCACCTCCCGGCGGCCTGAACAGGTCACGTGGGCAGCTCAGGAACAGGAGCTCGAGTCCCTTCGGGAGCAGCTGGAAGGAGTGAACCGCAGCATTGAGGAGGTTGAGGCCGACATGAAGACCCTGGGCGTCAGCTTTGTGCAGGCAGAGTCTGAGTGCCGGCACAGCAAGCTCAGTACAGCAGAGCGTGAGCAGGCCCTGCGCCTGAAGAGCCGCGCGGTGGAGCTGCTGCCCGATGGGACTGCCAACCTTGCCAAGCTGCAGCTTGTGGTGGAGAATAGTGCCCAGCGGGTCATCCACTTGGCGGGTCAGTGGGAGAAGCACCGGGTCCCACTCCTCGCTGAGTACCGCCACCTCCGAAAGCTGCAGGATTGCAGAGAGCTGGAATCTTCTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCGGCTGCTGAAGAGGCCCGCAGGAAGGAGGAGGTCTATAAGCAGCTGATGTCAGAGCTGGAGACTCTGCCCAGAGATGTGTCCCGGCTGGCCTACACCCAGCGCATCCTGGAGATCGTGGGCAACATCCGGAAGCAGAAGGAAGAGATCACCAAGATCTTGTCTGATACGAAGGAGCTTCAGAAGGAAATCAACTCCCTATCTGGGAAGCTGGACCGGACGTTTGCGGTGACTGATGAGCTTGTGTTCAAGGATGCCAAGAAGGACGATGCTGTTCGGAAGGCCTATAAGTATCTAGCTGCTCTGCACGAGAACTGCAGCCAGCTCATCCAGACCATCGAGGACACAGGCACCATCATGCGGGAGGTTCGAGACCTCGAGGAGCAGATCGAGACAGAGCTGGGCAAGAAGACCCTCAGCAACCTGGAGAAGATCCGGGAGGACTACCGAGCCCTCCGCCAGGAGAACGCTGGCCTCCTAGGCCGGGTCCGGGAGGCCTGA
Amino sequence
MEEADRILIHSLRQAGTAVPPDVQTLRAFTTELVVEAVVRCLRVINPAVGSGLSPLLPLAMSARFRLAMSLAQACMDLGYPLELGYQNFLYPSEPDLRDLLLFLAERLPTDASEDADQPAGDSAILLRAIGSQIRDQLALPWVPPHLRTPKLQHLQGSALQKPFHASRLVVPELSSRGEPREFQASPLLLPVPTQVPQPVGRVASLLEHHALQLCQQTGRDRPGDEDWVHRTSRLPPQEDTRAQRQRLQKQLTEHLRQSWGLLGAPIQARDLGELLQAWGAGAKTGAPKGSRFTHSEKFTFHLEPQAQATQVSDVPATSRRPEQVTWAAQEQELESLREQLEGVNRSIEEVEADMKTLGVSFVQAESECRHSKLSTAEREQALRLKSRAVELLPDGTANLAKLQLVVENSAQRVIHLAGQWEKHRVPLLAEYRHLRKLQDCRELESSRRLAEIQELHQSVRAAAEEARRKEEVYKQLMSELETLPRDVSRLAYTQRILEIVGNIRKQKEEITKILSDTKELQKEINSLSGKLDRTFAVTDELVFKDAKKDDAVRKAYKYLAALHENCSQLIQTIEDTGTIMREVRDLEEQIETELGKKTLSNLEKIREDYRALRQENAGLLGRVREA*