ENST00000622489.4 LRRC23
Information
- Transcript ID
- ENST00000622489.4
- Genome
- hg38
- Position
- chr12:6,904,733-6,914,241
- Strand
- +
- CDS length
- 609
- Amino acid length
- 203
- Gene symbol
- LRRC23
- Gene type
- protein-coding
- Gene description
- leucine rich repeat containing 23
- Gene Entrez Gene ID
- 10233
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 6,904,733 | 6,904,903 |
| 2 | 6,905,585 | 6,905,759 |
| 3 | 6,905,845 | 6,905,954 |
| 4 | 6,906,409 | 6,906,662 |
| 5 | 6,913,891 | 6,914,241 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 6,905,634 | 6,905,759 |
| 3 | CDS | 6,905,845 | 6,905,954 |
| 4 | CDS | 6,906,409 | 6,906,662 |
| 5 | CDS | 6,913,891 | 6,914,009 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 7,013,897 | 7,023,405 | Link |
CDS sequence
ATGTCAGATGAAGATGATCTAGAAGACTCTGAGCCAGACCAGGATGATTCTGAGAAAGAAGAGGACGAGAAGGAGACAGAGGAGGGGGAGGACTACAGAAAAGAGGGGGAAGAGTTCCCTGAGGAATGGCTGCCCACCCCCCTCACGGAGGACATGATGAAGGAAGGGCTTTCTCTGCTCTGTAAGACAGGCAATGGGCTGGCTCATGCTTATGTCAAGCTGGAGGTTAAAGAGAGGGACCTGACAGACATCTACTTGCTGCGCTCCTACATCCATCTGCGCTATGTGGATATTTCTGAGAACCACCTGACAGACCTGTCTCCACTCAACTACCTCACCCACCTGCTCTGGCTCAAGGCTGATGGCAATCGGCTGCGAAGTGCCCAGATGAATGAACTGCCCTACCTGCAGATTGCTAGTTTTGCTTATAACCAGATTACTGACACTGAAGGCATCTCTCATCCTCGTCTTGAAACCCTGAATCTCAAAGGAGATCAAAGACGCTGGCCTTCAGACCTGATCAGACTCCCAGGGGCAGCCACCACATGTATGACAGAGAACAGAGGATGCCTGTTTTTGCCCCAAAGCTGGAAATTCATCACAACCTGA
Amino sequence
MSDEDDLEDSEPDQDDSEKEEDEKETEEGEDYRKEGEEFPEEWLPTPLTEDMMKEGLSLLCKTGNGLAHAYVKLEVKERDLTDIYLLRSYIHLRYVDISENHLTDLSPLNYLTHLLWLKADGNRLRSAQMNELPYLQIASFAYNQITDTEGISHPRLETLNLKGDQRRWPSDLIRLPGAATTCMTENRGCLFLPQSWKFITT*