ENST00000272091.8 SDE2

Information
Transcript ID
ENST00000272091.8
Genome
hg38
Position
chr1:225,982,702-225,999,343
Strand
-
CDS length
1,356
Amino acid length
452
Gene symbol
SDE2
Gene type
protein-coding
Gene description
SDE2 telomere maintenance homolog
Gene Entrez Gene ID
163859
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 225,982,702 225,985,523
6 225,987,896 225,988,388
5 225,991,243 225,991,363
4 225,992,398 225,992,567
3 225,992,891 225,993,002
2 225,995,266 225,995,383
1 225,999,193 225,999,343
CDS
Exon number Type Start Stop
7 CDS 225,985,302 225,985,523
6 CDS 225,987,896 225,988,388
5 CDS 225,991,243 225,991,363
4 CDS 225,992,398 225,992,567
3 CDS 225,992,891 225,993,002
2 CDS 225,995,266 225,995,383
1 CDS 225,999,193 225,999,312
Other genome
Genome Chromosome Start End Links
hg19 chr1 226,170,403 226,187,044 Link
CDS sequence
ATGGCGGAGGCCGCGGCGCTGGTGTGGATTCGCGGCCCTGGCTTCGGGTGCAAGGCGGTGCGGTGTGCCTCGGGTCGGTGCACCGTCCGGGATTTTATCCACCGGCACTGCCAAGATCAGAATGTTCCAGTGGAAAACTTCTTTGTGAAATGCAATGGAGCACTCATTAACACCAGTGACACAGTGCAGCATGGAGCTGTTTATAGTTTGGAACCCAGACTTTGCGGTGGAAAAGGAGGTTTTGGATCTATGCTCCGAGCACTTGGTGCTCAGATTGAGAAGACAACCAATCGAGAAGCTTGTCGGGATCTCAGTGGAAGGAGACTACGCGATGTCAATCATGAAAAAGCAATGGCTGAATGGGTAAAACAACAAGCCGAGCGAGAGGCTGAAAAGGAGCAGAAGCGGCTGGAGCGACTGCAGCGGAAGCTTGTAGAACCCAAGCACTGCTTCACCAGCCCCGACTACCAGCAGCAGTGCCATGAGATGGCTGAGCGTCTGGAGGATTCCGTCCTCAAAGGTATGCAGGCTGCCTCCAGCAAGATGGTTTCAGCAGAAATCAGTGAGAATCGGAAACGGCAATGGCCTACTAAATCTCAAACAGACAGAGGAGCCAGTGCGGGAAAGAGGAGATGCTTCTGGTTGGGCATGGAGGGACTAGAGACTGCAGAAGGGTCCAACTCTGAGAGTTCAGATGATGACAGTGAAGAAGCACCAAGCACTTCAGGAATGGGTTTCCATGCTCCAAAAATTGGTAGCAATGGTGTCGAGATGGCAGCCAAATTTCCCAGTGGTTCTCAGAGGGCGAGAGTAGTGAATACAGACCATGGATCACCAGAACAACTGCAGATCCCGGTGACTGACTCTGGGAGGCATATTTTAGAAGACTCATGTGCTGAGCTGGGGGAGTCCAAAGAGCACATGGAAAGCAGGATGGTTACAGAAACAGAAGAGACCCAGGAGAAGAAGGCAGAGAGTAAAGAACCCATAGAAGAGGAGCCCACTGGGGCTGGACTGAATAAGGATAAAGAGACAGAAGAAAGGACTGATGGGGAAAGAGTTGCTGAGGTAGCACCTGAAGAAAGGGAAAACGTTGCCGTTGCCAAACTGCAGGAAAGCCAGCCAGGAAACGCAGTTATTGATAAGGAAACTATAGATTTATTGGCGTTCACCTCTGTTGCAGAACTGGAGTTGCTGGGTTTGGAGAAGCTCAAATGTGAACTGATGGCCCTTGGACTGAAATGTGGGGGCACTCTGCAGGAGCGGGCAGCAAGACTCTTCTCTGTCAGAGGACTGGCAAAGGAGCAAATTGACCCGGCTTTATTTGCCAAGCCTTTGAAAGGGAAGAAAAAATGA
Amino sequence
MAEAAALVWIRGPGFGCKAVRCASGRCTVRDFIHRHCQDQNVPVENFFVKCNGALINTSDTVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAKPLKGKKK*