ENST00000317402.11 GEN1

Information
Transcript ID
ENST00000317402.11
Genome
hg38
Position
chr2:17,753,858-17,788,941
Strand
+
CDS length
2,727
Amino acid length
909
Gene symbol
GEN1
Gene type
protein-coding
Gene description
GEN1 Holliday junction 5' flap endonuclease
Gene Entrez Gene ID
348654
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 17,753,858 17,753,967
2 17,759,929 17,760,104
3 17,761,396 17,761,582
4 17,764,897 17,765,073
5 17,766,579 17,766,689
6 17,768,738 17,768,811
7 17,771,196 17,771,287
8 17,772,634 17,772,784
9 17,773,096 17,773,132
10 17,773,219 17,773,299
11 17,774,271 17,774,401
12 17,778,002 17,778,063
13 17,779,978 17,780,121
14 17,780,621 17,788,941
CDS
Exon number Type Start Stop
2 CDS 17,759,944 17,760,104
3 CDS 17,761,396 17,761,582
4 CDS 17,764,897 17,765,073
5 CDS 17,766,579 17,766,689
6 CDS 17,768,738 17,768,811
7 CDS 17,771,196 17,771,287
8 CDS 17,772,634 17,772,784
9 CDS 17,773,096 17,773,132
10 CDS 17,773,219 17,773,299
11 CDS 17,774,271 17,774,401
12 CDS 17,778,002 17,778,063
13 CDS 17,779,978 17,780,121
14 CDS 17,780,621 17,781,939
Other genome
Genome Chromosome Start End Links
hg19 chr2 17,935,125 17,970,208 Link
CDS sequence
ATGGGAGTGAATGACTTGTGGCAAATTTTGGAGCCTGTTAAGCAACACATCCCCTTGCGTAATCTTGGTGGGAAAACCATTGCAGTTGATCTGAGTCTCTGGGTGTGTGAGGCACAGACAGTCAAAAAAATGATGGGCAGCGTCATGAAGCCCCACCTCAGGAACTTATTTTTTCGTATCTCATATTTAACACAAATGGATGTAAAACTGGTATTTGTTATGGAAGGGGAACCACCAAAGCTGAAAGCTGATGTCATAAGCAAGAGGAATCAGTCTCGGTATGGGTCTTCTGGAAAATCGTGGTCTCAGAAAACAGGGAGATCACATTTTAAATCAGTCTTAAGAGAGTGCCTCCATATGCTCGAATGCTTAGGAATCCCCTGGGTTCAGGCTGCTGGGGAAGCTGAAGCCATGTGTGCTTATCTCAATGCTGGTGGTCATGTCGATGGCTGCCTCACCAATGATGGAGATACTTTCCTTTATGGGGCCCAGACTGTTTACAGGAATTTCACTATGAATACAAAGGACCCACATGTTGACTGTTACACAATGTCATCTATCAAGAGTAAACTAGGTTTGGATAGAGATGCTCTGGTTGGATTAGCAATACTTCTTGGCTGTGATTATCTCCCAAAGGGAGTCCCTGGAGTTGGAAAAGAGCAAGCATTAAAACTTATACAGATTTTGAAAGGGCAAAGTTTACTTCAGAGGTTTAATCGGTGGAATGAAACATCTTGTAACTCTAGTCCACAACTGCTAGTCACTAAAAAACTGGCTCATTGTTCCGTATGTTCCCATCCAGGTTCACCTAAGGATCATGAACGTAATGGATGCAGATTATGTAAAAGTGATAAATATTGTGAGCCACATGACTATGAATACTGCTGTCCTTGTGAGTGGCACCGTACAGAACATGATAGGCAACTCAGTGAAGTAGAGAACAATATTAAGAAGAAAGCTTGCTGTTGTGAGGGATTCCCATTCCATGAGGTTATTCAAGAATTCCTTTTAAACAAGGATAAATTGGTGAAGGTTATCAGGTACCAAAGACCTGATTTGTTATTGTTTCAGAGATTTACTCTTGAAAAAATGGAGTGGCCCAATCACTATGCATGTGAGAAATTGCTGGTACTTTTGACCCATTATGACATGATAGAAAGAAAGCTTGGTAGCAGAAACTCTAATCAACTACAGCCAATTCGAATTGTTAAGACTCGAATCAGAAATGGAGTTCATTGTTTTGAAATAGAATGGGAAAAGCCTGAACATTATGCTATGGAAGATAAACAACATGGAGAATTTGCTTTATTAACAATTGAGGAAGAATCATTGTTTGAAGCAGCATATCCTGAGATCGTTGCTGTTTACCAAAAACAAAAGTTAGAAATTAAAGGGAAGAAACAAAAACGTATTAAGCCTAAAGAAAACAATTTGCCAGAACCAGATGAAGTAATGAGCTTTCAGTCACACATGACTTTAAAACCCACATGTGAAATCTTTCATAAGCAGAATTCCAAGTTAAATTCGGGGATTTCCCCTGATCCTACATTACCACAGGAATCTATTTCTGCCTCATTGAATAGCTTGCTTTTACCTAAAAATACTCCATGTTTGAATGCACAAGAACAGTTCATGTCTTCTCTAAGACCTTTGGCTATACAGCAAATTAAAGCTGTCAGTAAGTCTCTAATTTCAGAATCTAGTCAACCCAATACCTCATCTCATAATATATCCGTGATTGCTGATCTACACTTGAGCACTATTGACTGGGAAGGTACTTCTTTTAGTAATTCTCCAGCTATTCAAAGGAATACTTTTTCTCATGATTTAAAATCAGAAGTTGAATCAGAGCTATCAGCCATCCCTGATGGCTTTGAAAATATCCCAGAACAACTGTCCTGTGAATCAGAAAGGTACACTGCAAACATAAAGAAAGTGTTGGATGAGGATTCTGATGGGATTAGTCCTGAAGAGCATCTACTTTCTGGCATTACTGATTTATGTCTTCAGGATTTGCCTTTAAAGGAACGAATATTTACAAAATTATCATATCCTCAGGATAATCTACAACCAGATGTCAACCTGAAAACTTTGTCCATACTTAGTGTAAAAGAATCTTGTATTGCTAACAGTGGTTCTGATTGTACATCACATCTTTCAAAGGATCTTCCAGGAATTCCCTTGCAAAATGAATCCAGAGACTCTAAAATTCTAAAAGGAGACCAGCTGCTTCAAGAAGACTATAAAGTCAATACTTCTGTCCCTTATTCTGTCAGTAACACAGTGGTAAAGACCTGCAATGTTAGACCACCAAATACTGCTTTAGATCATAGTAGAAAAGTTGATATGCAAACCACTCGGAAAATTTTAATGAAGAAGAGTGTTTGCCTTGACAGACATTCCTCTGATGAACAAAGTGCCCCAGTGTTTGGGAAAGCTAAGTACACAACTCAAAGAATGAAGCACAGTTCTCAAAAGCATAATTCATCCCATTTCAAAGAAAGTGGCCATAACAAGTTGAGTAGCCCTAAGATACATATTAAAGAAACTGAACAGTGTGTCAGATCTTATGAAACAGCTGAAAATGAAGAAAGCTGTTTCCCAGATTCAACAAAAAGTTCTCTGAGTTCTCTACAATGTCATAAGAAAGAAAACAACTCTGGTACTTGTTTGGATAGCCCTCTTCCTTTACGCCAGAGATTAAAACTAAGATTCCAAAGCACTTGA
Amino sequence
MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSLLQRFNRWNETSCNSSPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLCKSDKYCEPHDYEYCCPCEWHRTEHDRQLSEVENNIKKKACCCEGFPFHEVIQEFLLNKDKLVKVIRYQRPDLLLFQRFTLEKMEWPNHYACEKLLVLLTHYDMIERKLGSRNSNQLQPIRIVKTRIRNGVHCFEIEWEKPEHYAMEDKQHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNLPEPDEVMSFQSHMTLKPTCEIFHKQNSKLNSGISPDPTLPQESISASLNSLLLPKNTPCLNAQEQFMSSLRPLAIQQIKAVSKSLISESSQPNTSSHNISVIADLHLSTIDWEGTSFSNSPAIQRNTFSHDLKSEVESELSAIPDGFENIPEQLSCESERYTANIKKVLDEDSDGISPEEHLLSGITDLCLQDLPLKERIFTKLSYPQDNLQPDVNLKTLSILSVKESCIANSGSDCTSHLSKDLPGIPLQNESRDSKILKGDQLLQEDYKVNTSVPYSVSNTVVKTCNVRPPNTALDHSRKVDMQTTRKILMKKSVCLDRHSSDEQSAPVFGKAKYTTQRMKHSSQKHNSSHFKESGHNKLSSPKIHIKETEQCVRSYETAENEESCFPDSTKSSLSSLQCHKKENNSGTCLDSPLPLRQRLKLRFQST*