ENST00000577427.1 SCO1

Information
Transcript ID
ENST00000577427.1
Genome
hg38
Position
chr17:10,680,354-10,697,530
Strand
-
CDS length
813
Amino acid length
271
Gene symbol
SCO1
Gene type
protein-coding
Gene description
synthesis of cytochrome C oxidase 1
Gene Entrez Gene ID
6341
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 10,680,354 10,681,253
5 10,686,727 10,686,842
4 10,691,872 10,691,964
3 10,692,857 10,692,961
2 10,695,741 10,695,831
1 10,697,235 10,697,530
CDS
Exon number Type Start Stop
6 CDS 10,681,119 10,681,253
5 CDS 10,686,727 10,686,842
4 CDS 10,691,872 10,691,964
3 CDS 10,692,857 10,692,961
2 CDS 10,695,741 10,695,831
1 CDS 10,697,235 10,697,507
Other genome
Genome Chromosome Start End Links
hg19 chr17 10,583,671 10,600,847 Link
CDS sequence
ATGGCGATGCTGGTCCTAGTACCCGGACGAGTTATGCGGCCTCTGGGTGGCCAACTTTGGCGCTTCTTGCCTCGCGGACTCGAGTTTTGGGGCCCAGCCGAGGGGACTGCGAGAGTCTTGCTGAGGCAGTTCTGCGCGCGGCAAGCGGAGGCGTGGCGTGCCTCGGGGCGCCCTGGCTATTGCCTGGGAACCCGGCCCCTCAGCACTGCGAGGCCGCCACCCCCGTGGTCGCAGAAGGGCCCCGGAGACTCCACGCGCCCCTCGAAGCCCGGGCCTGTTTCCTGGAAGTCTTTAGCAATCACATTTGCTATTGGAGGAGCTTTACTGGCTGGAATGAAGCACGTCAAGAAAGAAAAGGCAGAGAAGTTAGAGAAGGAACGGCAGCGACACATCGGCAAGCCTTTACTTGGGGGACCGTTTTCCCTCACAACTCATACTGGGGAGCGTAAAACTGACAAGGACTACTTGGATAGCATTACAACTCTGCCAGATCTAACTCCACTTTTCATCAGCATTGACCCAGAGAGGGACACAAAAGAAGCCATCGCAAATTATGTGAAAGAATTTTCTCCCAAACTGGTTGGCTTGACTGGCACGAGAGAAGAGGTCGATCAAGTGGCCAGAGCATACAGAGTGTATTACAGCCCTGGCCCCAAGGACGAAGATGAAGACTACATAGTGGATCACACAATAATAATGTACTTGATTGGACCAGATGGTGAGTTTCTAGATTATTTTGGCCAGAACAAGAGGAAGGGAGAAATAGCTGCTTCAATTGCCACACACATGAGGCCATACAGAAAAAAGAGCTAG
Amino sequence
MAMLVLVPGRVMRPLGGQLWRFLPRGLEFWGPAEGTARVLLRQFCARQAEAWRASGRPGYCLGTRPLSTARPPPPWSQKGPGDSTRPSKPGPVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEKERQRHIGKPLLGGPFSLTTHTGERKTDKDYLDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRPYRKKS*