ENST00000266743.6 SYCP3

Information
Transcript ID
ENST00000266743.6
Genome
hg38
Position
chr12:101,728,648-101,739,426
Strand
-
CDS length
711
Amino acid length
237
Gene symbol
SYCP3
Gene type
protein-coding
Gene description
synaptonemal complex protein 3
Gene Entrez Gene ID
50511
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 101,728,648 101,728,980
8 101,729,109 101,729,213
7 101,731,568 101,731,666
6 101,733,575 101,733,674
5 101,734,927 101,735,044
4 101,737,037 101,737,071
3 101,737,232 101,737,298
2 101,737,803 101,737,948
1 101,739,362 101,739,426
CDS
Exon number Type Start Stop
9 CDS 101,728,927 101,728,980
8 CDS 101,729,109 101,729,213
7 CDS 101,731,568 101,731,666
6 CDS 101,733,575 101,733,674
5 CDS 101,734,927 101,735,044
4 CDS 101,737,037 101,737,071
3 CDS 101,737,232 101,737,298
2 CDS 101,737,803 101,737,935
Other genome
Genome Chromosome Start End Links
hg19 chr12 102,122,426 102,133,204 Link
CDS sequence
ATGGTGTCCTCCGGAAAAAAGTATTCCAGGAAATCTGGGAAGCCGTCTGTGGAAGATCAGTTTACGAGAGCCTATGACTTTGAGACTGAAGATAAGAAAGATCTGAGTGGATCAGAGGAAGATGTTATTGAAGGGAAGACTGCAGTCATTGAGAAACGTAGGAAGAAAAGGTCTTCTGCAGGAGTAGTTGAAGATATGGGGGGTGAAGTGCAGAATATGCTGGAAGGAGTTGGAGTTGACATTAACAAGGCTCTTCTTGCCAAGAGAAAGAGACTAGAAATGTATACCAAGGCTTCTCTCAAAACTAGTAACCAGAAAATTGAACATGTTTGGAAAACACAACAAGATCAAAGGCAGAAGCTTAACCAAGAATATTCTCAGCAGTTTCTGACTTTGTTTCAGCAGTGGGATTTAGATATGCAGAAAGCTGAGGAACAAGAAGAAAAAATACTTAATATGTTTCGACAGCAACAAAAGATTCTTCAACAATCTAGAATTGTTCAGAGCCAGAGATTGAAAACAATTAAACAGTTATATGAGCAGTTCATAAAGAGTATGGAAGAGTTGGAGAAGAATCATGATAATCTACTTACTGGTGCACAAAATGAATTTAAAAAAGAAATGGCTATGTTGCAAAAAAAAATTATGATGGAAACTCAGCAGCAAGAGATAGCAAGTGTTCGGAAGTCTCTTCAATCCATGTTATTCTGA
Amino sequence
MVSSGKKYSRKSGKPSVEDQFTRAYDFETEDKKDLSGSEEDVIEGKTAVIEKRRKKRSSAGVVEDMGGEVQNMLEGVGVDINKALLAKRKRLEMYTKASLKTSNQKIEHVWKTQQDQRQKLNQEYSQQFLTLFQQWDLDMQKAEEQEEKILNMFRQQQKILQQSRIVQSQRLKTIKQLYEQFIKSMEELEKNHDNLLTGAQNEFKKEMAMLQKKIMMETQQQEIASVRKSLQSMLF*