ENST00000426855.6 SGSM2

Information
Transcript ID
ENST00000426855.6
Genome
hg38
Position
chr17:2,337,514-2,381,058
Strand
+
CDS length
3,021
Amino acid length
1,007
Gene symbol
SGSM2
Gene type
protein-coding
Gene description
small G protein signaling modulator 2
Gene Entrez Gene ID
9905
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 2,337,514 2,337,745
2 2,343,545 2,343,620
3 2,361,637 2,361,799
4 2,362,109 2,362,270
5 2,362,838 2,362,905
6 2,362,989 2,363,134
7 2,363,465 2,363,599
8 2,364,059 2,364,183
9 2,364,596 2,364,663
10 2,364,897 2,365,057
11 2,365,215 2,365,341
12 2,371,262 2,371,415
13 2,372,190 2,372,254
14 2,372,343 2,372,488
15 2,372,953 2,373,081
16 2,373,331 2,373,513
17 2,375,492 2,375,875
18 2,376,137 2,376,261
19 2,376,733 2,376,815
20 2,376,959 2,377,068
21 2,377,857 2,377,953
22 2,379,036 2,379,203
23 2,379,432 2,381,058
CDS
Exon number Type Start Stop
1 CDS 2,337,689 2,337,745
2 CDS 2,343,545 2,343,620
3 CDS 2,361,637 2,361,799
4 CDS 2,362,109 2,362,270
5 CDS 2,362,838 2,362,905
6 CDS 2,362,989 2,363,134
7 CDS 2,363,465 2,363,599
8 CDS 2,364,059 2,364,183
9 CDS 2,364,596 2,364,663
10 CDS 2,364,897 2,365,057
11 CDS 2,365,215 2,365,341
12 CDS 2,371,262 2,371,415
13 CDS 2,372,190 2,372,254
14 CDS 2,372,343 2,372,488
15 CDS 2,372,953 2,373,081
16 CDS 2,373,331 2,373,513
17 CDS 2,375,492 2,375,875
18 CDS 2,376,137 2,376,261
19 CDS 2,376,733 2,376,815
20 CDS 2,376,959 2,377,068
21 CDS 2,377,857 2,377,953
22 CDS 2,379,036 2,379,203
23 CDS 2,379,432 2,379,520
Other genome
Genome Chromosome Start End Links
hg19 chr17 2,240,808 2,284,352 Link
CDS sequence
ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGGTGAAGCAAATCATGGAGGAGGCTGTCACCAGGAAGTTTGTGCATGAAGACAGCAGCCACATCATTGCTTTATGTGGTGCAGTGGAGGCTTGCCTCTTGCATCAGCTGAGACGCCGTGCCGCTGGCTTCCTGCGCAGTGACAAGATGGCAGCCCTGTTCACCAAGGTGGGGAAGACGTGCCCAGTGGCGGGGGAGATTTGCCACAAGGTACAGGAGCTGCAGCAACAAGCAGAGGGCAGGAAACCCTCAGGGGTCAGCCAGGAGGCCCTGCGGAGACAGGGCTCAGCCAGCGGGAAGGCCCCGGCCCTCAGCCCTCAGGCCTTGAAACACGTATGGGTACGCACGGCGCTCATCGAGAAAGTTCTGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGCAAGTACTACGAGAAGGAGGCACTGCTGGCAGACCCTGTGTTCGGCCCGATCCTGGCCTCTCTTCTAGTGGGACCCTGTGCCTTGGAATACACTAAGCTCAAGACAGCCGATCACTACTGGACTGACCCCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGGGTCCACCTACTCGCCAGGACTCCCCTGCAAAGCGCCCAGCCCTGGGGATCCGGAAACGGCACTCAAGCGGCAGCGCGTCGGAGGACAGGCTGGCTGCCTGTGCCCGCGAGTGTGTGGAGTCCCTGCACCAGAACTCACGGACGCGGCTGCTCTATGGCAAGAACCACGTGCTGGTGCAGCCGAAGGAGGATATGGAGGCGGTCCCTGGCTACCTCTCCCTGCACCAGTCTGCAGAGAGCCTGACTCTGAAGTGGACCCCCAACCAGCTCATGAATGGGACTCTGGGGGACTCCGAGCTGGAAAAGAGCGTTTACTGGGACTATGCCCTCGTGGTGCCCTTCAGCCAGGTCGTGTGCATCCACTGCCACCAGCAAAAGAGCGGTGGCACGCTTGTGCTGGTGAGCCAGGATGGCATCCAGAGGCCGCCGCTGCATTTCCCACAGGGAGGACACCTGCTGTCCTTTCTGTCCTGTCTGGAGAATGGGCTGCTGCCTCGGGGACAGCTAGAGCCCCCGCTGTGGACCCAGCAAGGGAAGGGGAAAGTGTTCCCCAAGCTACGGAAACGAAGCAGCATTCGCTCCGTGGATATGGAGGAGATGGGCACGGGGCGGGCCACCGACTATGTGTTCCGGATCATCTACCCCGGCCACAGGCACGAGCACAACGCTGGTGACATGATCGAGATGCAGGGCTTTGGGCCCAGCCTGCCAGCCTGGCACCTGGAGCCCCTGTGCAGTCAGGGCTCCTCCTGCCTCTCCTGCTCCTCCAGCAGCTCCCCACATGCAACCCCCAGCCACTGTAGCTGCATCCCCGACCGGTTGCCGCTCAGGCTACTGTGTGAGAGTATGAAGAGGCAGATCGTGTCCCGGGCCTTCTACGGCTGGCTGGCACACTGCCGCCACCTGTCCACGGTGCGGACCCACCTGTCGGCGCTGGTGCACCATAGCGTTATCCCACCTGACCGGCCCCCGGGGGCCTCCGCGGGCCTCACCAAGGACGTGTGGAGCAAGTATCAGAAGGACAAAAAGAACTACAAAGAGCTGGAGCTGCTGCGGCAAGTTTACTACGGAGGCATAGAGCACGAGATCCGCAAGGACGTCTGGCCCTTTCTGCTTGGCCACTACAAGTTCGGCATGAGCAAGAAGGAGATGGAGCAGGTGGACGCAGTGGTGGCAGCAAGGTACCAGCAGGTGTTGGCAGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCAGCGGGAGCGGGAGGCCCACCCAGCCACACGCACCAAGTTCTCCTCAGGCAGCAGCATCGACAGCCACGTGCAGCGCCTCATCCACCGAGACTCCACCATCAGCAACGATGTGTTTATCTCAGTGGATGATCTGGAACCCCCGGAGCCCCAGGACCCTGAAGATTCCAGACCAAAACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAGCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGACTGCCCTCCTCTCGCAATTACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGGCAGAGCGTGGGCTTCGAAGAGGAGGACGGCGGTGGGGAGGAAGGCTCCAGTGGGCCCGGCCCTGCAGCTCACACTTTGAGGGAGCCCCAGGATCCCAGCCAGGAGAAGCCTCAGGCCGGAGAACTGGAGGCCGGAGAGGAGCTTGCGGCTGTGTGTGCGGCTGCCTACACTATAGAATTACTGGACACTGTGGCCTTAAACCTGCACCGCATAGACAAGGATGTGCAGAGGTGTGACCGCAACTACTGGTACTTCACGCCCCCCAACCTCGAGAGGCTCAGAGACGTCATGTGCAGCTACGTGTGGGAGCACCTGGACGTGGGCTATGTGCAGGGCATGTGCGATCTGCTGGCGCCTCTCCTGGTCACCCTCGACAATGATCAGCTGGCCTACAGCTGCTTCAGCCACCTCATGAAGAGGATGAGCCAGAACTTCCCCAACGGGGGTGCCATGGACACCCACTTTGCCAACATGCGCTCCCTCATCCAGATCCTGGACTCAGAGCTGTTTGAGCTGATGCATCAGAATGGAGACTACACCCACTTCTACTTCTGTTATCGCTGGTTCCTGCTGGATTTTAAGAGAGAACTGCTGTATGAGGATGTGTTTGCTGTGTGGGAGGTGATCTGGGCAGCCAGGCACATCTCATCGGAGCACTTTGTCCTGTTCATCGCCCTCGCCCTGGTGGAGGCCTACCGAGAGATCATCCGTGACAACAACATGGACTTCACTGACATCATCAAGTTTTTCAATGAACGTGCTGAGCATCACGATGCCCAGGAGATCCTGCGGATTGCCCGGGACCTCGTCCACAAGGTGCAGATGCTCATAGAGAACAAGTGA
Amino sequence
MGSAEDAVKEKLLWNVKKEVKQIMEEAVTRKFVHEDSSHIIALCGAVEACLLHQLRRRAAGFLRSDKMAALFTKVGKTCPVAGEICHKVQELQQQAEGRKPSGVSQEALRRQGSASGKAPALSPQALKHVWVRTALIEKVLDKVVQYLAENCSKYYEKEALLADPVFGPILASLLVGPCALEYTKLKTADHYWTDPSADELVQRHRIRGPPTRQDSPAKRPALGIRKRHSSGSASEDRLAACARECVESLHQNSRTRLLYGKNHVLVQPKEDMEAVPGYLSLHQSAESLTLKWTPNQLMNGTLGDSELEKSVYWDYALVVPFSQVVCIHCHQQKSGGTLVLVSQDGIQRPPLHFPQGGHLLSFLSCLENGLLPRGQLEPPLWTQQGKGKVFPKLRKRSSIRSVDMEEMGTGRATDYVFRIIYPGHRHEHNAGDMIEMQGFGPSLPAWHLEPLCSQGSSCLSCSSSSSPHATPSHCSCIPDRLPLRLLCESMKRQIVSRAFYGWLAHCRHLSTVRTHLSALVHHSVIPPDRPPGASAGLTKDVWSKYQKDKKNYKELELLRQVYYGGIEHEIRKDVWPFLLGHYKFGMSKKEMEQVDAVVAARYQQVLAEWKACEVVVRQREREAHPATRTKFSSGSSIDSHVQRLIHRDSTISNDVFISVDDLEPPEPQDPEDSRPKPEQEAGPGTPGTAVVEQQHSVEFDSPDSGLPSSRNYSVASGIQSSLDEGQSVGFEEEDGGGEEGSSGPGPAAHTLREPQDPSQEKPQAGELEAGEELAAVCAAAYTIELLDTVALNLHRIDKDVQRCDRNYWYFTPPNLERLRDVMCSYVWEHLDVGYVQGMCDLLAPLLVTLDNDQLAYSCFSHLMKRMSQNFPNGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWAARHISSEHFVLFIALALVEAYREIIRDNNMDFTDIIKFFNERAEHHDAQEILRIARDLVHKVQMLIENK*