ENST00000704049.1 RERE
Information
- Transcript ID
- ENST00000704049.1
- Genome
- hg38
- Position
- chr1:8,437,966-8,525,977
- Strand
- -
- CDS length
- 435
- Amino acid length
- 145
- Gene symbol
- RERE
- Gene type
- protein-coding
- Gene description
- arginine-glutamic acid dipeptide repeats
- Gene Entrez Gene ID
- 473
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 8,437,966 | 8,438,300 |
| 6 | 8,449,197 | 8,449,267 |
| 5 | 8,465,925 | 8,466,023 |
| 4 | 8,495,063 | 8,495,162 |
| 3 | 8,497,405 | 8,497,529 |
| 2 | 8,508,627 | 8,508,675 |
| 1 | 8,525,759 | 8,525,977 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 8,449,232 | 8,449,267 |
| 5 | CDS | 8,465,925 | 8,466,023 |
| 4 | CDS | 8,495,063 | 8,495,162 |
| 3 | CDS | 8,497,405 | 8,497,529 |
| 2 | CDS | 8,508,627 | 8,508,675 |
| 1 | CDS | 8,525,759 | 8,525,784 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr1 | 8,498,026 | 8,586,036 | Link |
CDS sequence
ATGGATGATCCATTCAGCCCCTGCAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAGATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCACTGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGCTGGAGGGCCTAAAACAAACAAACAGAAGACATGA
Amino sequence
MDDPFSPCRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVAGGPKTNKQKT*