ENST00000259883.3 PGBD1

Information
Transcript ID
ENST00000259883.3
Genome
hg38
Position
chr6:28,281,572-28,302,549
Strand
+
CDS length
2,430
Amino acid length
810
Gene symbol
PGBD1
Gene type
protein-coding
Gene description
piggyBac transposable element derived 1
Gene Entrez Gene ID
84547
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 28,281,572 28,281,918
2 28,283,756 28,284,209
3 28,285,551 28,285,707
4 28,287,080 28,287,168
5 28,296,816 28,296,945
6 28,297,895 28,297,991
7 28,300,724 28,302,549
CDS
Exon number Type Start Stop
2 CDS 28,283,814 28,284,209
3 CDS 28,285,551 28,285,707
4 CDS 28,287,080 28,287,168
5 CDS 28,296,816 28,296,945
6 CDS 28,297,895 28,297,991
7 CDS 28,300,724 28,302,284
Other genome
Genome Chromosome Start End Links
hg19 chr6 28,249,349 28,270,326 Link
CDS sequence
ATGTATGAAGCTTTGCCAGGCCCTGCTCCTGAAAATGAAGATGGCCTTGTGAAAGTGAAGGAGGAAGATCCCACCTGGGAGCAGGTGTGCAACTCACAGGAGGGCAGCTCCCACACTCAGGAGATTTGCCGCCTGCGCTTTCGGCACTTCTGCTACCAGGAGGCTCACGGACCCCAGGAAGCTCTGGCCCAACTCCGAGAACTTTGTCATCAATGGCTGAGACCGGAGATGCACACCAAGGAACAGATAATGGAACTGCTGGTGCTGGAGCAGTTCCTGACCATCCTGCCCAAGGAGCTCCAGCCCTGTGTGAAGACATATCCTCTGGAGAGTGGAGAGGAGGCAGTGACAGTGCTGGAGAATCTAGAGACAGGAAGTGGAGACACAGGACAACAGGCCTCTGTCTATATTCAGGGACAGGACATGCACCCAATGGTGGCAGAATATCAAGGAGTCTCTTTGGAGTGTCAGAGCCTCCAGCTCCTGCCTGGGATAACCACCCTGAAGTGTGAACCTCCACAGCGTCCTCAAGGGAACCCCCAAGAAGTGAGTGGGCCTGTTCCCCACGGATCAGCTCATCTCCAGGAAAAAAACCCCAGAGACAAGGCTGTAGTGCCTGTGTTTAACCCAGTCAGGTCCCAGACATTGGTGAAGACTGAGGAAGAAACAGCCCAGGCCGTTGCTGCAGAGAAGTGGTCACATCTGAGTCTGACTCGGAGGAACCTCTGTGGGAACTCAGCTCAGGAGACAGTTATGAGCCTCAGTCCGATGACTGAAGAAATTGTAACTAAAGATAGATTGTTTAAAGCAAAGCAAGAAACTTCTGAAGAAATGGAACAAAGTGGAGAAGCCTCAGGAAAGCCCAACAGAGAGTGTGCACCCCAGATTCCTTGTAGTACTCCTATTGCTACTGAAAGGACAGTTGCACATTTGAACACTCTGAAGGACCGTCACCCAGGTGATTTGTGGGCCCGCATGCACATCTCATCCCTGGAATATGCTGCAGGAGACATTACCCGAAAAGGGAGAAAAAAAGACAAAGCTCGAGTGAGTGAACTGCTCCAAGGCCTCTCATTCTCTGGTGACTCAGATGTGGAAAAAGATAATGAGCCTGAGATCCAGCCTGCTCAAAAGAAGTTAAAGGTATCATGTTTCCCAGAAAAGAGTTGGACCAAAAGAGACATTAAACCCAATTTTCCAAGCTGGTCAGCACTGGATTCTGGACTTTTGAATCTCAAGAGCGAAAAGTTGAACCCAGTAGAGCTTTTTGAATTATTTTTTGATGATGAAACATTCAACTTAATTGTCAATGAAACCAATAATTATGCTTCTCAGAAAAATGTCAGCTTGGAAGTCACAGTTCAGGAAATGAGGTGTGTGTTTGGTGTCTTACTTTTGAGTGGATTTATGAGGCATCCTAGAAGGGAAATGTATTGGGAAGTCTCTGACACCGATCAGAACCTGGTTAGAGATGCAATCAGAAGGGACAGATTTGAATTGATTTTCTCAAACCTGCACTTTGCAGATAATGGCCACCTAGATCAAAAAGATAAGTTTACAAAGTTGAGACCTCTCATAAAACAAATGAATAAAAATTTCCTCTTGTATGCTCCCCTGGAAGAATACTATTGCTTTGATAAGTCAATGTGTGAATGCTTTGATAGTGACCAATTCCTGAATGGAAAGCCTATTAGAATTGGCTATAAAATTTGGTGTGGTACAACCACACAGGGTTATCTGGTTTGGTTTGAACCCTATCAAGAAGAATCAACTATGAAGGTAGATGAGGATCCTGATCTTGGGTTAGGTGGAAATCTAGTGATGAACTTCGCTGATGTTCTTTTAGAGAGAGGTCAGTATCCCTATCACCTGTGTTTTGATAGCTTCTTTACAAGTGTCAAATTGTTGTCAGCCTTGAAAAAGAAGGGGGTGAGGGCAACAGGAACAATTCGTGAGAACAGGACCGAAAAATGTCCCCTTATGAATGTAGAACATATGAAAAAAATGAAGAGAGGGTATTTTGATTTCCGAATAGAAGAAAACAATGAGATAATTTTGTGTCGTTGGTATGGGGATGGCATTATCAGTCTGTGCTCCAATGCTGTGGGCATAGAACCAGTCAATGAGGTAAGCTGTTGTGATGCTGATAACGAAGAAATCCCTCAGATAAGTCAACCATCCATAGTAAAAGTGTATGATGAATGCAAGGAAGGTGTAGCTAAAATGGATCAAATTATTTCGAAATACAGGGTGAGGATAAGAAGCAAGAAATGGTACTCAATTTTGGTGAGCTACATGATTGATGTAGCCATGAACAATGCATGGCAACTACACAGAGCCTGTAACCCAGGTGCTTCTCTAGACCCCTTGGATTTTCGGAGATTTGTTGCACATTTCTACTTGGAACACAATGCTCATCTGTCAGATTAG
Amino sequence
MYEALPGPAPENEDGLVKVKEEDPTWEQVCNSQEGSSHTQEICRLRFRHFCYQEAHGPQEALAQLRELCHQWLRPEMHTKEQIMELLVLEQFLTILPKELQPCVKTYPLESGEEAVTVLENLETGSGDTGQQASVYIQGQDMHPMVAEYQGVSLECQSLQLLPGITTLKCEPPQRPQGNPQEVSGPVPHGSAHLQEKNPRDKAVVPVFNPVRSQTLVKTEEETAQAVAAEKWSHLSLTRRNLCGNSAQETVMSLSPMTEEIVTKDRLFKAKQETSEEMEQSGEASGKPNRECAPQIPCSTPIATERTVAHLNTLKDRHPGDLWARMHISSLEYAAGDITRKGRKKDKARVSELLQGLSFSGDSDVEKDNEPEIQPAQKKLKVSCFPEKSWTKRDIKPNFPSWSALDSGLLNLKSEKLNPVELFELFFDDETFNLIVNETNNYASQKNVSLEVTVQEMRCVFGVLLLSGFMRHPRREMYWEVSDTDQNLVRDAIRRDRFELIFSNLHFADNGHLDQKDKFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMCECFDSDQFLNGKPIRIGYKIWCGTTTQGYLVWFEPYQEESTMKVDEDPDLGLGGNLVMNFADVLLERGQYPYHLCFDSFFTSVKLLSALKKKGVRATGTIRENRTEKCPLMNVEHMKKMKRGYFDFRIEENNEIILCRWYGDGIISLCSNAVGIEPVNEVSCCDADNEEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRIRSKKWYSILVSYMIDVAMNNAWQLHRACNPGASLDPLDFRRFVAHFYLEHNAHLSD*