ENST00000503800.1 GSX2

Information
Transcript ID
ENST00000503800.1
Genome
hg38
Position
chr4:54,100,173-54,102,227
Strand
+
CDS length
405
Amino acid length
135
Gene symbol
GSX2
Gene type
protein-coding
Gene description
GS homeobox 2
Gene Entrez Gene ID
170825
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 54,100,173 54,100,707
2 54,101,582 54,102,227
CDS
Exon number Type Start Stop
1 CDS 54,100,345 54,100,707
2 CDS 54,101,582 54,101,623
Other genome
Genome Chromosome Start End Links
hg19 chr4 54,966,340 54,968,394 Link
CDS sequence
ATGTCGCGCTCCTTCTATGTCGACTCGCTCATCATCAAGGACACCTCACGGCCTGCGCCCTCGCTGCCTGAACCGCACCCCGGGCCGGATTTCTTCATCCCGCTTGGCATGCCGCCCCCATTGGTGATGTCCGTGTCCGGCCCCGGCTGCCCGTCCCGCAAGAGCGGCGCGTTCTGCGTGTGCCCTCTCTGCGTCACTTCGCACCTGCACTCCTCTCGGGGGTCTGTGGGCGCCGGCAGCGGGGGCGCAGGGGCCGGGGTTACCGGGGCCGGAGGCAGTGGGGTGGCAGGGGCCGCAGGGGCACTGCCTCTGCTTAAGGGCCAGTTCTCTTCGGCTCCTGGGGACGCGCAGTTTTGCCCGCGGGAGGCTCTGACGCCAGCCAGGTACCCAATGGCAAGAGGATGA
Amino sequence
MSRSFYVDSLIIKDTSRPAPSLPEPHPGPDFFIPLGMPPPLVMSVSGPGCPSRKSGAFCVCPLCVTSHLHSSRGSVGAGSGGAGAGVTGAGGSGVAGAAGALPLLKGQFSSAPGDAQFCPREALTPARYPMARG*