ENST00000588780.5 CAPNS1

Information
Transcript ID
ENST00000588780.5
Genome
hg38
Position
chr19:36,140,968-36,149,993
Strand
+
CDS length
837
Amino acid length
279
Gene symbol
CAPNS1
Gene type
protein-coding
Gene description
calpain small subunit 1
Gene Entrez Gene ID
826
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 36,140,968 36,141,220
2 36,142,300 36,142,333
3 36,142,652 36,142,741
4 36,142,909 36,142,966
5 36,143,064 36,143,128
6 36,145,776 36,145,874
7 36,145,976 36,146,054
8 36,146,196 36,146,312
9 36,149,578 36,149,636
10 36,149,813 36,149,993
CDS
Exon number Type Start Stop
1 CDS 36,141,012 36,141,220
2 CDS 36,142,300 36,142,333
3 CDS 36,142,652 36,142,741
4 CDS 36,142,909 36,142,966
5 CDS 36,143,064 36,143,128
6 CDS 36,145,776 36,145,874
7 CDS 36,145,976 36,146,054
8 CDS 36,146,196 36,146,312
9 CDS 36,149,578 36,149,636
10 CDS 36,149,813 36,149,839
Other genome
Genome Chromosome Start End Links
hg19 chr19 36,631,870 36,640,895 Link
CDS sequence
ATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGGTGGGGGCCTGGGAAATGTGCTTGGAGGCCTGATCAGCGGGGCCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGAGGCGGCGGTGGCGGTGGAACGGCCATGCGCATCCTAGGCGGAGTCATCAGCGCCATCAGCGAGGCGGCTGCGCAGTACAACCCGGAGCCCCCGCCCCCACGCACACATTACTCCAACATTGAGGCCAACGAGAGTGAGGAGGTCCGGCAGTTCCGGAGACTCTTTGCCCAGCTGGCTGGAGATGACATGGAGGTCAGCGCCACAGAACTCATGAACATTCTCAATAAGGTTGTGACACGACACCCTGATCTGAAGACTGATGGTTTTGGCATTGACACATGTCGCAGCATGGTGGCCGTGATGGATCTGTCACTCTTCTTAACACCCTCCCACCAGAGCGACACCACAGGCAAGCTGGGCTTTGAGGAATTCAAGTACTTGTGGAACAACATCAAAAGGTGGCAGGCCATATACAAACAGTTCGACACTGACCGATCAGGGACCATTTGCAGTAGTGAACTCCCAGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCTCTATAACATGATCATCCGACGCTACTCAGATGAAAGTGGGAACATGGATTTTGACAACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGATGGCACTGGACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCTGACTATGTATTCCTGA
Amino sequence
MFLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEPPPPRTHYSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDLSLFLTPSHQSDTTGKLGFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTMYS*