ENST00000596580.2 FARP1

Information
Transcript ID
ENST00000596580.2
Genome
hg38
Position
chr13:98,143,416-98,407,494
Strand
+
CDS length
2,406
Amino acid length
802
Gene symbol
FARP1
Gene type
protein-coding
Gene description
FERM, ARH/RhoGEF and pleckstrin domain protein 1
Gene Entrez Gene ID
10160
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 98,143,416 98,143,492
2 98,213,220 98,213,413
3 98,343,762 98,343,866
4 98,365,395 98,365,437
5 98,368,117 98,368,195
6 98,377,821 98,377,918
7 98,384,730 98,384,844
8 98,385,667 98,385,814
9 98,388,383 98,388,478
10 98,389,957 98,390,120
11 98,390,812 98,390,880
12 98,393,643 98,393,718
13 98,395,227 98,407,494
CDS
Exon number Type Start Stop
2 CDS 98,213,243 98,213,413
3 CDS 98,343,762 98,343,866
4 CDS 98,365,395 98,365,437
5 CDS 98,368,117 98,368,195
6 CDS 98,377,821 98,377,918
7 CDS 98,384,730 98,384,844
8 CDS 98,385,667 98,385,814
9 CDS 98,388,383 98,388,478
10 CDS 98,389,957 98,390,120
11 CDS 98,390,812 98,390,880
12 CDS 98,393,643 98,393,718
13 CDS 98,395,227 98,396,468
Other genome
Genome Chromosome Start End Links
hg19 chr13 98,795,670 99,059,748 Link
CDS sequence
ATGGGAGAAATAGAGCAGAGGCCGACCCCAGGATCACGACTGGGGGCCCCGGAAAATTCGGGGATCAGTACCTTGGAACGTGGACAGAAGCCGCCCCCAACACCTTCAGGAAAACTCGTGTCCATCAAAATCCAGATGCTGGATGACACCCAGGAGGCATTTGAAGTTCCACAAAGAGCTCCTGGGAAGGTGCTGCTGGATGCAGTTTGCAACCACCTCAACCTCGTGGAAGGTGACTATTTTGGCCTCGAGTTTCCTGATCACAAAAAGATCACGGTGTGGCTGGATCTCCTAAAACCCATTGTGAAACAGATTAGAAGGCCAAAGCACGTTGTTGTTAAGTTTGTGGTGAAATTCTTTCCGCCTGACCACACACAACTCCAAGAAGAACTCACAAGGTACCTGTTCGCGCTGCAGGTGAAGCAGGACTTGGCTCAAGGCAGGTTGACGTGTAATGACACCAGCGCAGCTCTCTTGATTTCACACATTGTGCAATCTGAGATTGGGGATTTTGATGAAGCCTTGGACAGAGAGCACTTAGCAAAAAATAAATACATACCTCAGCAAGACGCACTAGAGGACAAAATCGTGGAATTTCACCATAACCACATTGGACAAACACCAGCAGAATCAGATTTCCAGCTCCTAGAGATTGCCCGTCGGCTAGAGATGTATGGAATCCGGTTGCACCCGGCCAAGGACAGGGAAGGCACGAAGATCAATCTGGCCGTTGCCAACACGGGAATTCTAGTGTTTCAGGGTTTCACTAAGATCAATGCCTTCAACTGGGCCAAGGTGCGGAAGCTGAGCTTCAAGAGGAAGCGCTTTCTCATCAAGCTCCGGCCAGATGCCAATAGTGCGTACCAGGATACCTTGGAATTCCTGATGGCCAGTCGGGATTTCTGCAAGTCCTTCTGGAAAATCTGTGTTGAACATCATGCCTTCTTTAGACTTTTTGAAGAGCCCAAACCAAAGCCCAAGCCCGTCCTCTTTAGCCGGGGGTCATCATTTCGGTTCAGTGGTCGGACTCAGAAGCAGGTTCTCGACTATGTTAAAGAAGGAGGACATAAGAAGGTGCAGTTTGAAAGGAAGCACAGCAAGATTCATTCTATCCGGAGCCTTGCTTCACAGCCTACAGAACTGAATTCGGAAGTGCTGGAGCAGTCTCAGCAGAGCACCAGCCTTACATTTGGAGAAGGTGCCGAATCTCCAGGGGGCCAGAGCTGCCGGCGAGGAAAGGAACCGAAGGTTTCCGCCGGGGAGCCGGGGTCGCACCCGAGCCCTGCGCCGAGGAGAAGCCCCGCGGGTAACAAGCAGGCGGACGGAGCCGCCTCGGCGCCCACGGAGGAAGAGGAGGAGGTCGTTAAGGATAGGACCCAGCAGAGTAAACCTCAGCCCCCGCAGCCAAGCACAGGTCCAGCATCCCGGGCTGCCAGAGGCAGCAGTACTTCCATTCCTTTCATTGACTGCAGTGACGTAGATAGCGAATACGACCTTCTTAGAGAACAAGCGTCCCGATCCCGGTCCCGATCCCGGTCCCGGTCCCAAACAAATGACAATTATGAGGGTGATCTGACCAGCGGTGTCTATCTGCTGTCCAGGGAGGAGGGGCGAAGAGAGGCTGGGCGTAGGGCTTCCCCGCACTCTGCGAAGTCCTCCCGGCCTCCTTCCGGAGAATTCCTTGATGACGATTCAGCAGACATCACCTTTGATATGAGCGGGAGCCCTCGACTCCCAAGGCATAGCTCTCTCATAGATGAAATGTTCAAGGGCTCGGCTGGTCACAGCCCCCTGGCCACCCCATTGTCTCCCAGCAGCAGCAGTTCAAGTCCAAATATGAGTTGGGACAGAACTGGGTCTCAAGGCTATGTTTCGGAAAATGGACATGACCATAGAGAGGGGAGTATGGGAGAAGACACTCTCCCGGACCAGGGTCCTCCTTATGAACGCTGGTCCCCCACCTCGCCAAGGCCATACATGCGGAATCTTCCTGGTAGATGTAATAAGTCAGAGACAGATCCACTCATCCTTAGCCAGGTAGCATTTACCCCGGAGGCCATGGATGGGCTTGGTGGCCGTGGGAAGTGGGGGCAAGCCAGCGCAGCTGCTCCCGAGGGTAGAAGCCTGGCTAATGGCACACCCCCCATGGGTGCAGCCTCTAAGGTCCCTGCTGTGCAGTCGGTGTGTGCCAGAGGCATGGCGGGGCAGCTGGCACCCCTGCAAGTGACCGAGGGCTCCACCAGCAGTGGGACTGAGTCCAGTGAGTCAGACTCTGAGATGCTGATCCCCGGGAGTCAGCCCCTCATATTTGGTAACCCCGCAGTGCTGCGTTCCCCGTCCCTGCTGAGAAGCCGGGGGTCCTTGGGTGGCCTGCGTTTGAGTGAGGAACAGGAGGAGGATGAGTGA
Amino sequence
MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGDYFGLEFPDHKKITVWLDLLKPIVKQIRRPKHVVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTSAALLISHIVQSEIGDFDEALDREHLAKNKYIPQQDALEDKIVEFHHNHIGQTPAESDFQLLEIARRLEMYGIRLHPAKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRFLIKLRPDANSAYQDTLEFLMASRDFCKSFWKICVEHHAFFRLFEEPKPKPKPVLFSRGSSFRFSGRTQKQVLDYVKEGGHKKVQFERKHSKIHSIRSLASQPTELNSEVLEQSQQSTSLTFGEGAESPGGQSCRRGKEPKVSAGEPGSHPSPAPRRSPAGNKQADGAASAPTEEEEEVVKDRTQQSKPQPPQPSTGPASRAARGSSTSIPFIDCSDVDSEYDLLREQASRSRSRSRSRSQTNDNYEGDLTSGVYLLSREEGRREAGRRASPHSAKSSRPPSGEFLDDDSADITFDMSGSPRLPRHSSLIDEMFKGSAGHSPLATPLSPSSSSSSPNMSWDRTGSQGYVSENGHDHREGSMGEDTLPDQGPPYERWSPTSPRPYMRNLPGRCNKSETDPLILSQVAFTPEAMDGLGGRGKWGQASAAAPEGRSLANGTPPMGAASKVPAVQSVCARGMAGQLAPLQVTEGSTSSGTESSESDSEMLIPGSQPLIFGNPAVLRSPSLLRSRGSLGGLRLSEEQEEDE*