ENST00000538628.5 OGFOD2
Information
- Transcript ID
- ENST00000538628.5
- Genome
- hg38
- Position
- chr12:122,974,752-122,979,438
- Strand
- +
- CDS length
- 561
- Amino acid length
- 187
- Gene symbol
- OGFOD2
- Gene type
- protein-coding
- Gene description
- 2-oxoglutarate and iron dependent oxygenase domain containing 2
- Gene Entrez Gene ID
- 79676
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 122,974,752 | 122,975,121 |
| 2 | 122,975,811 | 122,975,867 |
| 3 | 122,976,654 | 122,976,767 |
| 4 | 122,976,871 | 122,977,166 |
| 5 | 122,978,325 | 122,978,569 |
| 6 | 122,978,753 | 122,979,010 |
| 7 | 122,979,083 | 122,979,438 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 122,978,531 | 122,978,569 |
| 6 | CDS | 122,978,753 | 122,979,010 |
| 7 | CDS | 122,979,083 | 122,979,346 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 123,459,299 | 123,463,985 | Link |
CDS sequence
ATGCCTAAGGGGAGGCCCAACACCATGAACAACTACGGGGTGCTGCTGCACGAGCTCGGGCTGGACGAGCCGCTGATGACACCACTGCGGGAGCGCTTCCTGCAGCCGCTGATGGCCCTGCTGTACCCTGACTGTGGCGGGGGCCGGCTCGACAGCCACCGGGCCTTTGTGGTCAAATACGCACCGGGCCAGGACCTGGAGCTGGGCTGCCACTATGATAATGCCGAGCTCACCCTCAATGTGGCCTTGGGCAAGGTCTTCACAGGGGGCGCCCTGTATTTTGGGGGCCTCTTCCAGGCACCCACAGCCCTGACGGAGCCCCTGGAGGTGGAGCACGTGGTGGGCCAGGGTGTCCTCCACCGTGGCGGCCAGCTGCATGGAGCCCGGCCCTTGGGCACTGGTGAGCGTTGGAACCTTGTCGTCTGGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATGTGCTGCCGTGAGCCCGACCTGGTGGACGATGAGGGCTTCGGTGATGGCTTCACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCTCACCTGA
Amino sequence
MPKGRPNTMNNYGVLLHELGLDEPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLNVALGKVFTGGALYFGGLFQAPTALTEPLEVEHVVGQGVLHRGGQLHGARPLGTGERWNLVVWLRASAVRNSLCPMCCREPDLVDDEGFGDGFTREEPATVDVCALT*