ENST00000544999.2 HOXD8

Information
Transcript ID
ENST00000544999.2
Genome
hg38
Position
chr2:176,130,022-176,132,100
Strand
+
CDS length
561
Amino acid length
187
Gene symbol
HOXD8
Gene type
protein-coding
Gene description
homeobox D8
Gene Entrez Gene ID
3234
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency
TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence
Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 176,130,022 176,130,167
2 176,130,327 176,130,483
3 176,130,796 176,130,943
4 176,131,317 176,132,100
CDS
Exon number Type Start Stop
2 CDS 176,130,367 176,130,483
3 CDS 176,130,796 176,130,943
4 CDS 176,131,317 176,131,612
Other genome
Genome Chromosome Start End Links
hg19 chr2 176,994,750 176,996,828 Link
CDS sequence
ATGAGTTCGTACTTCGTGAACCCGCTGTACTCCAAGTACAAGGCGGCGGCTGCGGCGGCGGCGGCGGCGGGCGAGGCCATCAATCCCACTTACTACGACTGTCACTTCGCGCCCGAGAGACAGCCGATTTTTACGACCCAGCAAGAGGCCGAGCTGGTACAATATCCTGACTGTAAATCGTCCAGTGGTAATATTGGCGAGGACCCAGACCACTTAAATCAGAGCTCGTCTCCTTCTCAAATGTTTCCGTGGATGAGACCACAAGCAGCTCCTGGTAGACGAAGAGGAAGACAAACCTACAGTCGCTTCCAAACTCTAGAGTTGGAAAAGGAATTTCTTTTTAACCCCTATCTGACCAGGAAAAGAAGAATCGAGGTTTCCCACGCCCTAGCCCTCACCGAGAGACAGGTAAAAATCTGGTTCCAGAACAGGAGAATGAAATGGAAAAAGGAAAACAACAAGGACAAATTTCCCGTTTCCCGGCAGGAGGTGAAGGACGGGGAAACGAAAAAGGAAGCCCAAGAGCTGGAGGAAGACAGAGCCGAAGGCCTGACAAATTAA
Amino sequence
MSSYFVNPLYSKYKAAAAAAAAAGEAINPTYYDCHFAPERQPIFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNKDKFPVSRQEVKDGETKKEAQELEEDRAEGLTN*