ENST00000340487.5 ZSCAN16
Information
- Transcript ID
- ENST00000340487.5
- Genome
- hg38
- Position
- chr6:28,124,609-28,130,082
- Strand
- +
- CDS length
- 1,047
- Amino acid length
- 349
- Gene symbol
- ZSCAN16
- Gene type
- protein-coding
- Gene description
- zinc finger and SCAN domain containing 16
- Gene Entrez Gene ID
- 80345
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 28,124,609 | 28,124,677 |
| 2 | 28,125,413 | 28,125,830 |
| 3 | 28,126,783 | 28,126,921 |
| 4 | 28,129,430 | 28,130,082 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 28,125,444 | 28,125,830 |
| 3 | CDS | 28,126,783 | 28,126,921 |
| 4 | CDS | 28,129,430 | 28,129,950 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr6 | 28,092,387 | 28,097,860 | Link |
CDS sequence
ATGACCACAGCCCTGGAACCTGAGGACCAAAAAGGACTTCTGATAATTAAGGCAGAGGACCATTACTGGGGACAGGATTCCAGCTCACAAAAGTGCAGTCCTCACAGGAGGGAACTCTATAGACAACACTTCAGGAAGCTCTGCTATCAGGATGCACCTGGACCCCGTGAAGCTCTTACCCAGCTGTGGGAGCTCTGCCGTCAGTGGCTGAGGCCAGAATGCCACACCAAGGAGCAGATTTTAGACCTGCTGGTGCTAGAACAGTTCCTGAGCATTCTTCCTAAAGACCTGCAAGCATGGGTGCGTGCACACCATCCAGAGACTGGAGAGGAGGCAGTGACGGTACTGGAGGATCTGGAGAGAGAGCTTGATGAACCTGGAAAGCAGGTCCCAGGCAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCCTTGGGAAGGCCATATGAATCACTGACTGTCCAGCTCCATCCCAAAAAGACCCAGCTGGAGCAGGAAGCTGGGAAACCACAAAGGAATGGTGATAAAACTAGGACTAAGAATGAAGAGTTGTTCCAGAAGGAAGATATGCCCAAAGACAAGGAATTCCTTGGGGAGATAAATGACAGACTGAACAAAGATACTCCTCAGCATCCTAAGTCCAAAGATATTATTGAAAATGAGGGCAGATCAGAATGGCAACAGAGGGAAAGAAGACGATATAAATGTGATGAATGTGGGAAAAGTTTCAGTCATAGCTCAGACCTTAGTAAACACAGGAGAACTCACACGGGAGAGAAGCCCTATAAATGTGATGAGTGTGGAAAAGCCTTCATTCAGCGCTCACATCTCATTGGACATCATAGAGTACACACGGGAGTAAAACCCTATAAATGTAAAGAATGTGGGAAAGACTTCAGTGGGCGCACAGGTCTTATTCAGCATCAGAGAATCCACACAGGTGAAAAACCCTATGAATGTGATGAGTGTGGAAGGCCTTTCCGAGTAAGTTCAGCTCTTATTAGACATCAAAGAATTCATACCGCAAATAAACTCTACTAA
Amino sequence
MTTALEPEDQKGLLIIKAEDHYWGQDSSSQKCSPHRRELYRQHFRKLCYQDAPGPREALTQLWELCRQWLRPECHTKEQILDLLVLEQFLSILPKDLQAWVRAHHPETGEEAVTVLEDLERELDEPGKQVPGNSERRDILMDKLAPLGRPYESLTVQLHPKKTQLEQEAGKPQRNGDKTRTKNEELFQKEDMPKDKEFLGEINDRLNKDTPQHPKSKDIIENEGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGVKPYKCKECGKDFSGRTGLIQHQRIHTGEKPYECDECGRPFRVSSALIRHQRIHTANKLY*