Information

Transcript ID: ENST00000513264.1
Genome: hg38
Position: chr8:142,680,457-142,681,770
Strand: +
CDS length: 165
Amino acid length: 55
Gene symbol: PSCA
Gene type: protein-coding
Gene description: prostate stem cell antigen
Gene Entrez Gene ID: 8000

Variants

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MGeND data only All data

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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

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Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Exon

Exon number	Start	Stop
1	142,680,457	142,680,563
2	142,681,327	142,681,770

CDS

Exon number	Type	Start	Stop
1	CDS	142,680,539	142,680,563
2	CDS	142,681,327	142,681,466

Other genome

Genome	Chromosome	Start	End	Links
hg19	chr8	143,761,875	143,763,188	Link

CDS sequence

ATGGCAGGCTTGGCCCTGCAGCCAGGCACTGCCCTGCTGTGCTACTCCTGCAAAGCCCAGGTGAGCAACGAGGACTGCCTGCAGGTGGAGAACTGCACCCAGCTGGGGGAGCAGTGCTGGACCGCGCGCATCCGTGAGTGGGGGGACGACAGCCGCCAGGCCTAG

Amino sequence

MAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIREWGDDSRQA*

ENST00000513264.1 PSCA

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