ENST00000396684.3 ATN1
Information
- Transcript ID
- ENST00000396684.3
- Genome
- hg38
- Position
- chr12:6,927,959-6,942,321
- Strand
- +
- CDS length
- 3,573
- Amino acid length
- 1,191
- Gene symbol
- ATN1
- Gene type
- protein-coding
- Gene description
- atrophin 1
- Gene Entrez Gene ID
- 1822
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 6,927,959 | 6,928,384 |
| 2 | 6,933,840 | 6,934,028 |
| 3 | 6,934,176 | 6,934,313 |
| 4 | 6,934,465 | 6,934,578 |
| 5 | 6,935,547 | 6,937,561 |
| 6 | 6,937,845 | 6,938,067 |
| 7 | 6,938,481 | 6,939,177 |
| 8 | 6,940,880 | 6,941,023 |
| 9 | 6,941,374 | 6,941,554 |
| 10 | 6,941,747 | 6,942,321 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 6,934,002 | 6,934,028 |
| 3 | CDS | 6,934,176 | 6,934,313 |
| 4 | CDS | 6,934,465 | 6,934,578 |
| 5 | CDS | 6,935,547 | 6,937,561 |
| 6 | CDS | 6,937,845 | 6,938,067 |
| 7 | CDS | 6,938,481 | 6,939,177 |
| 8 | CDS | 6,940,880 | 6,941,023 |
| 9 | CDS | 6,941,374 | 6,941,554 |
| 10 | CDS | 6,941,747 | 6,941,780 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 7,037,122 | 7,051,484 | Link |
CDS sequence
ATGAAGACACGACAGAATAAAGACTCGATGTCAATGAGGAGTGGACGGAAGAAAGAGGCCCCTGGGCCCCGGGAAGAACTGAGATCGAGGGGCCGGGCCTCCCCTGGAGGGGTCAGCACGTCCAGCAGTGATGGCAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGCCCGAGTAGAGGAAGCCTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGAGATCTCAGAGAGTGAAAGTGAGGAGACCAATGCACCAAAAAAGACCAAAACTGAGCAGGAACTCCCTCGGCCACAGTCTCCCTCCGATCTGGATAGCTTGGACGGGCGGAGCCTTAATGATGATGGCAGCAGCGACCCTAGGGATATCGACCAGGACAACCGAAGCACGTCCCCCAGTATCTACAGCCCTGGAAGTGTGGAGAATGACTCTGACTCATCTTCTGGCCTGTCCCAGGGCCCAGCCCGCCCCTACCACCCACCTCCACTCTTTCCTCCTTCCCCTCAACCGCCAGACAGCACCCCTCGACAGCCAGAGGCTAGCTTTGAACCCCATCCTTCTGTGACACCCACTGGATATCATGCTCCCATGGAGCCCCCCACATCTCGAATGTTCCAGGCTCCTCCTGGGGCCCCTCCCCCTCACCCACAGCTCTATCCTGGGGGCACTGGTGGAGTTTTGTCTGGACCCCCAATGGGTCCCAAGGGGGGAGGGGCTGCCTCATCAGTGGGGGGCCCTAATGGGGGTAAGCAGCACCCCCCACCCACTACTCCCATTTCAGTATCAAGCTCTGGGGCTAGTGGTGCTCCCCCAACAAAGCCGCCTACCACTCCAGTGGGTGGTGGGAACCTACCTTCTGCTCCACCACCAGCCAACTTCCCCCATGTGACACCGAACCTGCCTCCCCCACCTGCCCTGAGACCCCTCAACAATGCATCAGCCTCTCCCCCTGGCCTGGGGGCCCAACCACTACCTGGTCATCTGCCCTCTCCCCACGCCATGGGACAGGGTATGGGTGGACTTCCTCCTGGCCCAGAGAAGGGCCCAACTCTGGCTCCTTCACCCCACTCTCTGCCTCCTGCTTCCTCTTCTGCTCCAGCGCCCCCCATGAGGTTTCCTTATTCATCCTCTAGTAGTAGCTCTGCAGCAGCCTCCTCTTCCAGTTCTTCCTCCTCTTCCTCTGCCTCCCCCTTCCCAGCTTCCCAGGCATTGCCCAGCTACCCCCACTCTTTCCCTCCCCCAACAAGCCTCTCTGTCTCCAATCAGCCCCCCAAGTATACTCAGCCTTCTCTCCCATCCCAGGCTGTGTGGAGCCAGGGTCCCCCACCACCTCCTCCCTATGGCCGCCTCTTAGCCAACAGCAATGCCCATCCAGGCCCCTTCCCTCCCTCTACTGGGGCCCAGTCCACCGCCCACCCACCAGTCTCAACACATCACCATCACCACCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCACGGAAACTCTGGGCCCCCTCCTCCTGGAGCATTTCCCCACCCACTGGAGGGCGGTAGCTCCCACCACGCACACCCTTACGCCATGTCTCCCTCCCTGGGGTCTCTGAGGCCCTACCCACCAGGGCCAGCACACCTGCCCCCACCTCACAGCCAGGTGTCCTACAGCCAAGCAGGCCCCAATGGCCCTCCAGTCTCTTCCTCTTCCAACTCTTCCTCTTCCACTTCTCAAGGGTCCTACCCATGTTCACACCCCTCCCCTTCCCAGGGCCCTCAAGGGGCGCCCTACCCTTTCCCACCGGTGCCTACGGTCACCACCTCTTCGGCTACCCTTTCCACGGTCATTGCCACCGTGGCTTCCTCGCCAGCAGGCTACAAAACGGCCTCCCCACCTGGGCCCCCACCGTACGGAAAGAGAGCCCCGTCCCCGGGGGCCTACAAGACAGCCACCCCACCCGGATACAAACCCGGGTCGCCTCCCTCCTTCCGAACGGGGACCCCACCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCGGGCTCGCCCACCGTGGGACCTGGGCCCCTGCCACCTGCGGGGCCCTCAGGCCTGCCATCGCTGCCACCACCACCTGCGGCCCCTGCCTCAGGGCCGCCCCTGAGCGCCACGCAGATCAAACAGGAGCCGGCTGAGGAGTATGAGACCCCCGAGAGCCCGGTGCCCCCAGCCCGCAGCCCCTCGCCCCCTCCCAAGGTGGTAGATGTACCCAGCCATGCCAGTCAGTCTGCCAGGTTCAACAAACACCTGGATCGCGGCTTCAACTCGTGCGCGCGCAGCGACCTGTACTTCGTGCCACTGGAGGGCTCCAAGCTGGCCAAGAAGCGGGCCGACCTGGTGGAGAAGGTGCGGCGCGAGGCCGAGCAGCGCGCGCGCGAAGAAAAGGAGCGCGAGCGCGAGCGGGAACGCGAGAAAGAGCGCGAGCGCGAGAAGGAGCGCGAGCTTGAACGCAGCGTGAAGTTGGCTCAGGAGGGCCGTGCTCCGGTGGAATGCCCATCTCTGGGCCCAGTGCCCCATCGCCCTCCATTTGAACCGGGCAGTGCGGTGGCTACAGTGCCCCCCTACCTGGGTCCTGACACTCCAGCCTTGCGCACTCTCAGTGAATATGCCCGGCCTCATGTCATGTCTCCTGGCAATCGCAACCATCCATTCTACGTGCCCCTGGGGGCAGTGGACCCGGGGCTCCTGGGTTACAATGTCCCGGCCCTGTACAGCAGTGATCCAGCTGCCCGGGAGAGGGAACGGGAAGCCCGTGAACGAGACCTCCGTGACCGCCTCAAGCCTGGCTTTGAGGTGAAGCCTAGTGAGCTGGAACCCCTACATGGGGTCCCTGGGCCGGGCTTGGATCCCTTTCCCCGACATGGGGGCCTGGCTCTGCAGCCTGGCCCACCTGGCCTGCACCCTTTCCCCTTTCATCCGAGCCTGGGGCCCCTGGAGCGAGAACGTCTAGCGCTGGCAGCTGGGCCAGCCCTGCGGCCTGACATGTCCTATGCTGAGCGGCTGGCAGCTGAGAGGCAGCACGCAGAAAGGGTGGCGGCCCTGGGCAATGACCCACTGGCCCGGCTGCAGATGCTCAATGTGACTCCCCATCACCACCAGCACTCCCACATCCACTCGCACCTGCACCTGCACCAGCAAGATGCTATCCATGCAGCCTCTGCCTCGGTGCACCCTCTCATTGACCCCCTGGCCTCAGGGTCTCACCTTACCCGGATCCCCTACCCAGCTGGAACTCTCCCTAACCCCCTGCTTCCTCACCCTCTGCACGAGAACGAAGTTCTTCGTCACCAGCTCTTTGCTGCCCCTTACCGGGACCTGCCGGCCTCCCTTTCTGCCCCGATGTCAGCAGCTCATCAGCTGCAGGCCATGCACGCACAGTCAGCTGAGCTGCAGCGCTTGGCGCTGGAACAGCAGCAGTGGCTGCATGCCCATCACCCGCTGCACAGTGTGCCGCTGCCTGCCCAGGAGGACTACTACAGTCACCTGAAGAAGGAAAGCGACAAGCCACTGTAG
Amino sequence
MKTRQNKDSMSMRSGRKKEAPGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVRREAEQRAREEKEREREREREKEREREKERELERSVKLAQEGRAPVECPSLGPVPHRPPFEPGSAVATVPPYLGPDTPALRTLSEYARPHVMSPGNRNHPFYVPLGAVDPGLLGYNVPALYSSDPAAREREREARERDLRDRLKPGFEVKPSELEPLHGVPGPGLDPFPRHGGLALQPGPPGLHPFPFHPSLGPLERERLALAAGPALRPDMSYAERLAAERQHAERVAALGNDPLARLQMLNVTPHHHQHSHIHSHLHLHQQDAIHAASASVHPLIDPLASGSHLTRIPYPAGTLPNPLLPHPLHENEVLRHQLFAAPYRDLPASLSAPMSAAHQLQAMHAQSAELQRLALEQQQWLHAHHPLHSVPLPAQEDYYSHLKKESDKPL*