ENST00000539754.5 REXO2
Information
- Transcript ID
- ENST00000539754.5
- Genome
- hg38
- Position
- chr11:114,439,471-114,450,039
- Strand
- +
- CDS length
- 669
- Amino acid length
- 223
- Gene symbol
- REXO2
- Gene type
- protein-coding
- Gene description
- RNA exonuclease 2
- Gene Entrez Gene ID
- 25996
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 114,439,471 | 114,439,675 |
| 2 | 114,440,656 | 114,440,739 |
| 3 | 114,443,856 | 114,443,933 |
| 4 | 114,444,586 | 114,444,652 |
| 5 | 114,445,979 | 114,446,087 |
| 6 | 114,447,826 | 114,447,879 |
| 7 | 114,449,846 | 114,450,039 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 114,439,529 | 114,439,675 |
| 2 | CDS | 114,440,656 | 114,440,739 |
| 3 | CDS | 114,443,856 | 114,443,933 |
| 4 | CDS | 114,444,586 | 114,444,652 |
| 5 | CDS | 114,445,979 | 114,446,087 |
| 6 | CDS | 114,447,826 | 114,447,879 |
| 7 | CDS | 114,449,846 | 114,449,975 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 114,310,193 | 114,320,761 | Link |
CDS sequence
ATGCTAGGCGGCTCCCTGGGCTCCAGGCTGTTGCGGGGTGTAGGTGGGAGTCACGGACGGTTCGGGGCCCGAGGTGTCCGCGAAGGTGGCGCAGCCATGGCGGCAGGGGAGAGCATGGCTCAGCGGATGGTCTGGGTGGACCTGGAGATGACAGGATTGGACATTGAGAAGGACCAGATTATTGAGATGGCCTGTCTGATAACTGACTCTGATCTCAACATTTTGGCTGAAGGTCCTAACCTGATTATAAAACAACCAGATGAGTTGCTGGACAGCATGTCAGATTGGTGTAAGGAGCATCACGGGAAGCAGGCAGAGTATGAATTTCTGTCCTTTGTACGACAGCAGACTCCTCCAGGGCTCTGTCCACTTGCAGGAAATTCAGTTCATGAAGATAAGAAGTTTCTTGACAAATACATGCCCCAGTTCATGAAACATCTTCATTATAGAATAATTGATGTGAGCACTGTTAAAGAACTGTGCAGACGCTGGTATCCAGAAGAATATGAATTTGCACCAAAGAAGGCTGCTTCTCATAGGGCACTTGATGACATTAGTGAAAGCATCAAAGAGCTTCAGTTTTACCGAAATAACATCTTCAAGAAAAAAATAGATGAAAAGAAGAGGAAAATTATAGAAAATGGGGAAAATGAGAAGACCGTGAGTTGA
Amino sequence
MLGGSLGSRLLRGVGGSHGRFGARGVREGGAAMAAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKIDEKKRKIIENGENEKTVS*